Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0979 ATGGAAGGTGGTGACATGAGAGTGGCCAGTGCACGCATAGGCAGCTCTAGCATTTGGAGAAGCAGTGCTGCAGATGTATTTTCAGGGTCTTCACTCAGGGACGACGATGAACATGACCTTAAATGGGCTGCAATTGAGAAGCTTCCAACATACCTACGTATGACGAGGGGCATACTCGCCGAATCCGAAGGTCAACCTCAAGAGATTGATATAAATAAACTCGGCCCACTTCAGAGGAAGAATCTCGTGGAGAGGCTAGTCAAGATTGCAGAGGAAGATAATGAAAGGTTCTTGCTGAAGCTCAGAGACCGCATTGACCGCGTTGGGCTGGACTTTCCTACGATTGAGGTTCATTTCGAGCATTTAAACGTGGAAGCAGAAGCTCATCTAGGAAGCAGAGGATTGCCCACAATCTTCAACTTCTGTGTTAACATGTTAGAGGGTTTCTTGAACTCTTTGCACCTTCTTCCCAGTAGAAAGAAGCCGCTCACCATTCTTCATGATGTTAGTGGGATCATCAAGCCTAGAAGAATGACATTGCTCTTGGGGCCTCCAAGCTCTGGAAAGACCACATTATTACTGGCACTGGCTGGAAGACTCAGTAAAGATCTCAAATTTTATGGGCGAGTTACGTATAATGGGTATGGCATGGATGAGTTTGTACCTCAAAGAACATCAGCGTACATAAGTCAACATGATCTCCATATAGGAGAAATGACAGTGAGAGAAACGTTGGCTTTTTCAGCAAGATGCCAAGGGACAGGAAGCCGTTATGAGATGCTGACGGAATTATCAAGAAGAGAGAAGGCAGCGAATATTAAGCCAGATCCTGATCTTGATATTTATATGAAGGCGGCAGCACTAGAAGGCCAAGAAACCAATGTTGTAACAGATTATATTATGAAGATTCTGGGACTAGAGACATGTGCTGATACGCTGGTCGGAGATGACATGATTCGGGGAATTTCTGGCGGGCAAAAGAAGAGAGTCACAACAGGTGAGATGCTGGTGGGACCAGCAAGAGCACTTTTCATGGATGAAATATCAACTGGTTTGGATAGCTCTACCACATTCCATATGGTGAATTCTCTGAGACAATCAATCCACATCCTTAATGGAACAGCCGTTGTTTCTCTTCTACAGCCAGCGCCAGAAACCTATGAACTATTTGATGATATAATTCTCCTTTCTGATGGACATATCGTCTATCAGGGTCCACGTGACAACGTGCTTGAGTTCTTTGAATACATGGGCTTCAAATGCCCAGAGAGGAAAGGAGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAAAGATCAAGAACAGTACTGGGCAAATAAAGATGAGCCATATACCTTTGTCACTGTAAAAGAATTTGTGGATGCATTTCAATCATTTCACGTTGGCCGAAAACTTGGTGATGAACTTGCTACTCCATTTGACAAGTCCAAGGGCCACCCTGCTGCTTTAAACAAAAAGAAGTACGGTGTTAACAAGAAGGAGCTGCTAAAAGCTTGCATATCCAGAGAATTTTTGCTCATGAAGAGGAATTCCTTTGTCTATATTTTCAAAACACAGCAACTGATTGTAATGGCTCTCATAACAATGACGCTATTTCTGCGAACTGAGATGCATCGGGACACAGTAGCAGATGGTGGCATCTATATGGGAGCTCTGTTCTTCGTACTCATTATGATTATGTTTAATGGATTTTCGGAGCTATCTATGACCATTGCGAAACTCCCTGTCTTCTATAAGCAAAGAGACCTTTTGTTTTATCCTTCTTGGGCATACGCTTTGCCTACATGGATCCTTAAGATTCCTATTACCATAGTTGAAGTTGCTGTTTGGGTGGTGTTGACTTACTATGTTATAGGCTTTGATCCAAACATCGAGAGGTTCTTCAAACAGTTCCTTTTGCTCCTGTGTATCAATCAAATGGCATCTGGGCTTTTTCGATTCATGGGGGCAGTTGGGAGGAACTTAATTGTCGCAAACACTTTTGGGTCTTTCTCTTTGCTTGCAATTATGGTGATGGGTGGATTTATCCTTGCAAGAGATGACGTGAAGAATTGGTGGTTATGGGGTTACTGGTTCTCACCCATGATGTATGGTCAGAATGCTATAGCTGTGAATGAATTCCTTGGGAATAGTTGGGCACATGTTCCTCCTAATTTAACAGAACCATTAGGAGTACAAGTTCTTAAGTCACGAGGGCTCTTCCCTCAAGCATACTGGTATTGGATTGGAGTTGGAGCTTCCATTGGTTACATGTTCTTGTTCAATTTCCTTTTCGCTTTGGCCTTGCACTATCTTGATCCATTTGAAAAACCCCAAGCAGTAATATCAAAAGAGGACTTGGCCGAGAAAAATGCTAGCAGAAACGGACAGGTCATTGAACTATCATCAACACAACAAAGGTCTTCTGAAAAAGGGAATGAAAGTCGAAGAAGTGTGTCATCCAGAACACTCTCTACAAGAGTAGGTAATGTTAGCGAAGCAGATCACAATAGGAAACGTGGGATGGTTCTTCCTTTTACTCCTCTTTCTATGACTTTTGACGAAATTAGATATGCCGTGGACATGCCACAGGAGATGAAAGCACAAGGCATTACTGAGGATAGACTTGAACTATTGAAGGGTGTTACCGGAGTATTTAGGCCAGGAGTTCTTACAGCACTAATGGGCATAAGCGGAGCCGGAAAAACTACGTTAATGGATGTGTTGGCTGGACGAAAAACAACTGGACATACTGAGGGATCTATAACTATATCAGGCTATCCAAAGAAGCAGGAAACTTTCGCTCGCGTATCAGGATACTGCGAGCAAAATGATATTCACTCTCCCCATGTCACAATTTACGAGTCTCTGGTTTACTCAGCATGGCTTCGCTTACCCCCTAAGGTTGATGCTGCCACAAAAATGATGTTTGTTGAGGAAGTGATGGAATTGGTGGAGTTGAAATCATTAAGAGAAGCGCTTGTTGGGTTACCTGGAGTAAATGGTCTATCTACAGAACAACGAAAGAGACTAACAATTGCAGTTGAACTTGTAGCCAACCCGTCTATTATATTCATGGATGAACCAACATCTGGCCTTGATGCCAGAGCTGCAGCTATAGTAATGAGGACAGTCAGGAATACTGTAGACACAGGACGAACCGTAGTTTGCACAATTCACCAACCTAGCATAGATATATTTGATGCTTTTGACGAGTTACTTCTATTAAAAAGAGGAGGCGAGGAAATTTACGCGGGACCTTTAGGCCTGCATTGTTCTCATCTTATCAATTATTTTGAGGTAATTAACGGGGTTCCAAAAATTAAGAATGGCTATAATCCTGCCACGTGGATGTTGGAGGTTACCTCAGAGGCCCAAGAAACTGCACTTCAAGTTAACTTTACCGAAATATACAAGAACTCTGACATGTATAAGAGAAACAAGGACATGATCAGAGAACTGAGCATAGCACCACCAGGCTCAACCGACTTGTACTTTCCAACAAAGTACTCACAATCATTCTTTAGTCAGTGCAAGGCTTGCTTTTGGAAACAACATCTGTCATATTGGCGAAATCCACCGTACACTGCAGTGAGACTTTTCTTCACAACGGTCATTGCTTTATTATTCGGAACCATATTTTGGGATATTGGCTCCAAAAGGCAAAAGCAACAAGATCTTTTCAATGCAATGGGATCGATGTACGCCGCAATACTGTTCATAGGGGTGCAGAATGCTTCATCAGTACAACCAGTGGTGGCCATTGAGAGGACAGTCTTCTACAGAGAGAAGGCAGCAGGAATGTACTCTGCCTTGCCGTATGCATTTGCACAGGTTGCTATTGAGATCCCATACATCTTCGTACAAGCTGCCATATATGGGGTCATAGTATACGCCATGATTGGATTTGAATGGACGGTCAACAAGTTCTTCTGGTACCTCTTCTTCATGTTCTTCTCCTTCTTATACTTCACCTTCTATGGAATGATGGCAGTGGCTATGACACCTGATCATAACATTGCTGCTATAGTTTCCTTTGGCTTCTACCTAATGTGGAACCTTTTCTCCGGATTCGTCATTCCCCGAACTAGGATTCCAGTATGGTGGAGATGGTACTACTGGATTTGCCCAGTGTCTTGGACCTTGTATGGATTGTTCGCTTCACAATTTGGAGATGTAAAGGACACATTGGAGTCTGGAGAGACAGTGGAAGAGTTTTTGAGGAATTATTTTGGGTATAGGCATGATTTTCTAGGCATAGTTGCCGTGGGGGTTGCTGGCATTTCAGTGTTGTTTGGACTTATCTTTGCCTTCTCAATCAAGGCATTTAATTTCCAAAAGAGATAA 4347 0.4288 MEGGDMRVASARIGSSSIWRSSAADVFSGSSLRDDDEHDLKWAAIEKLPTYLRMTRGILAESEGQPQEIDINKLGPLQRKNLVERLVKIAEEDNERFLLKLRDRIDRVGLDFPTIEVHFEHLNVEAEAHLGSRGLPTIFNFCVNMLEGFLNSLHLLPSRKKPLTILHDVSGIIKPRRMTLLLGPPSSGKTTLLLALAGRLSKDLKFYGRVTYNGYGMDEFVPQRTSAYISQHDLHIGEMTVRETLAFSARCQGTGSRYEMLTELSRREKAANIKPDPDLDIYMKAAALEGQETNVVTDYIMKILGLETCADTLVGDDMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDSSTTFHMVNSLRQSIHILNGTAVVSLLQPAPETYELFDDIILLSDGHIVYQGPRDNVLEFFEYMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYTFVTVKEFVDAFQSFHVGRKLGDELATPFDKSKGHPAALNKKKYGVNKKELLKACISREFLLMKRNSFVYIFKTQQLIVMALITMTLFLRTEMHRDTVADGGIYMGALFFVLIMIMFNGFSELSMTIAKLPVFYKQRDLLFYPSWAYALPTWILKIPITIVEVAVWVVLTYYVIGFDPNIERFFKQFLLLLCINQMASGLFRFMGAVGRNLIVANTFGSFSLLAIMVMGGFILARDDVKNWWLWGYWFSPMMYGQNAIAVNEFLGNSWAHVPPNLTEPLGVQVLKSRGLFPQAYWYWIGVGASIGYMFLFNFLFALALHYLDPFEKPQAVISKEDLAEKNASRNGQVIELSSTQQRSSEKGNESRRSVSSRTLSTRVGNVSEADHNRKRGMVLPFTPLSMTFDEIRYAVDMPQEMKAQGITEDRLELLKGVTGVFRPGVLTALMGISGAGKTTLMDVLAGRKTTGHTEGSITISGYPKKQETFARVSGYCEQNDIHSPHVTIYESLVYSAWLRLPPKVDAATKMMFVEEVMELVELKSLREALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYAGPLGLHCSHLINYFEVINGVPKIKNGYNPATWMLEVTSEAQETALQVNFTEIYKNSDMYKRNKDMIRELSIAPPGSTDLYFPTKYSQSFFSQCKACFWKQHLSYWRNPPYTAVRLFFTTVIALLFGTIFWDIGSKRQKQQDLFNAMGSMYAAILFIGVQNASSVQPVVAIERTVFYREKAAGMYSALPYAFAQVAIEIPYIFVQAAIYGVIVYAMIGFEWTVNKFFWYLFFMFFSFLYFTFYGMMAVAMTPDHNIAAIVSFGFYLMWNLFSGFVIPRTRIPVWWRWYYWICPVSWTLYGLFASQFGDVKDTLESGETVEEFLRNYFGYRHDFLGIVAVGVAGISVLFGLIFAFSIKAFNFQKR 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0979 1448 MobiDBLite consensus disorder prediction 798 832 - -
Prci2g0979 1448 Gene3D - 153 460 IPR027417 -
Prci2g0979 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 423 IPR027417 -
Prci2g0979 1448 CDD ABCG_PDR_domain2 848 1086 IPR034003 -
Prci2g0979 1448 FunFam ABC transporter G family member 34 153 457 - -
Prci2g0979 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 423 IPR003439 GO:0005524
Prci2g0979 1448 Pfam Plant PDR ABC transporter associated 719 782 IPR013581 -
Prci2g0979 1448 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 6 1448 - -
Prci2g0979 1448 FunFam ABC transporter G family member 40 865 1095 - -
Prci2g0979 1448 SMART AAA_5 888 1080 IPR003593 GO:0016887
Prci2g0979 1448 SMART AAA_5 175 400 IPR003593 GO:0016887
Prci2g0979 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 874 1081 IPR027417 -
Prci2g0979 1448 Pfam ABC-transporter N-terminal 90 141 IPR029481 -
Prci2g0979 1448 CDD ABCG_PDR_domain1 145 405 IPR034001 -
Prci2g0979 1448 Pfam ABC-2 type transporter 381 433 IPR043926 GO:0140359
Prci2g0979 1448 Pfam ABC transporter 879 1031 IPR003439 GO:0005524
Prci2g0979 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 851 1103 IPR003439 GO:0005524
Prci2g0979 1448 Pfam ABC-2 type transporter 502 714 IPR013525 GO:0016020|GO:0140359
Prci2g0979 1448 Pfam ABC-2 type transporter 1177 1390 IPR013525 GO:0016020|GO:0140359
Prci2g0979 1448 Gene3D - 866 1090 IPR027417 -
Prci2g0979 1448 Pfam ABC transporter 166 348 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0979 Prci-Chr2 7244448 7251435 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0979 K08711 - gmx:100804030 2508.79