Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0978 ATGGAGAGGAACGAAGTGTCCAGAGTTAGTAGTTTACGTGAAATCAGCAGAGCTGAGAGCCTCCGCGCGAATGGTTCTCAAGTCTGGAGGAGTAATAGCATGGAAATGTTCTCAGCCTCTGCTCGTGAAGATGATGAAGAAGCTCTTAAGTGGGCAGCAATAGAGAGACTTCCAACGTATCTACGAATAAGGAGAAGCATACTCACTAATGATGAGGGTAATGCTAAAGAAATCGATATCAAGCAACTGGGATTAACGGAGAGAAAAATTCTGTTGGATAGACTATTGAAATTTGCGGAAGAAGATAACGAACAGTTCTTGTTGAAACTTAAGCAACGCATGGACCGAGTTGGACTTGAGATTCCAACAATTGAAGTTCGATTTGAGCATATAAATGTGAAGGCAGAAGTCTACGTTGGAAGCAGGGCATTACCTACAATGTTCAACTTCTTTGTGAATGTCTTGGAGGATTTCCTAAATTATCTCCACATCATTCCGAGTCCAAAGAAACCACTATATATCCTTCAGAATGTTAGTGGAATCATAAAGCCTCAAAGAATGACCTTGCTTTTAGGGCCCCCAGGCTCTGGAAAGACTACTTTGCTATTGGCCCTGGCTGGAAAACTCAGTAAGGACTTAAAATATTCTGGGAGAGTCACATATAATGGTCATGGGCTGGACGAGTTTGTACCACAGAGGACATCAGCTTATATTAGTCAAGATGACATCCACGTTGGAGAAATGACTGTGAGGGAAACACTCTCTTTCTCTGCCAGATGTCAAGGGGTTGGGCAGAATTATGAGATGCTAGCAGAACTACTTAGAAGAGAGAAGGAGGCAAAGATAAAACCGGACCCCGATATTGATGCCTACATGAAGGCAGCAGCATTAGAAGGGCAGGAAACAAGCGTGGTCACTGACTACATTTTGAAGATTTTGGGACTTGAATTATGTGCTGATATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGTGGACAGAAAAAGCGAGTTACAACAGGGGAGATGCTGGTGGGACCTGTAAGAGTGTTATTCATGGATGAGATATCAACTGGCTTGGACAGCTCAACAACTTTTCAAATTATCAATTCAATCCGGCAATCAATCCATATTCTCAATGGAACTGCGCTTGTTTCTCTCCTACAGCCAGCACCAGAAACTTATGAGCTATTTGATGATATAATACTCCTCACAGATGGGCAAATTGTGTACCATGGTCCCAGAGAGAAAGTACTCGACTTCTTTGAATCTATGGGCTTCAAATGTCCTGAGAGAAAAGGAGTTGCTGACTTCTTGCAAGAAGTGACGTCAAGGAAAGATCAATGGCAGTACTGGGCACGCAAAGATGAACCTTACAGTTTCGTTACAGTCAAGGATTTTGTTGAAGCCTTCCAGTCATTTCACGTTGGTCATGTACTTGGAGAAGAACTAGCCAATCCTTTTGACAAGACCAAATGTCACCCGGCTTCCTTGAGCACAAAAAAATATGGTGTTAGCAAGAAGGAGCTGCTGAGGGCTTGTGTTGGCAGAGAATTTTTGCTTATGAAGAGAAATTCATTTGTCTACATATTCAAACTGACCTTACTAAGCTATTTAGCGATCACGACAGCAACGTTATTTCTACGAACTAAGATGCATAAAAATACTGTTGCGGATGGAGGAACTTATATGGGTGCTCTGTTCTTCGCAATCATTGTGGCTATGTTCAATGGAATATCAGAGCTAAACATGACAATCATGAAACTTCCTGTCTTCTACAAGCAAAGAGACCTTCATTTCTATCCTTCATGGGCCTACTCTCTACCACCATGGATCCTCAAAATACCATTCAGCCTGGTAGAAGTTGCCATTTGGGAAGTAATAACATATTATGTCATCGGCTTTGATCCCGATATTACAAGGTTTTTCAAACAGTACCTGCTACTCTTGTGCCTTAACCAGATGGCATCTGCACTATTTCGATTGATGGCCGCATTAGGACGGGATATTGTAGTTGCAAACACTGCTGGGGCATTTGCTTTACTTGTCATCATGGTTTTGGGAGGATTTGTGATTTCACGAGAGGATGTACACAAATGGTTTCTGTGGGGCTACTGGTCCTCGCCACTTATGTACGCTCAGAATGCTATTGCCGTTAATGAATTTCTCGGGCATAGATGGAGAAAGCTTATTGTCGATGGGAATGAAACATTGGGAGTCATGGTACTGAAAGCTCGTGGGTTTTTCCCAGAAACTTATTGGTATTGGATTGGAATAGGGGCTTTGATTGGTTATACCTTCCTATTTAATTTCATTTACACATCGGCTTTGCAATATCTGAGTCCATTCAGAAAGGCACAAGCTGGGCTATCCCATGAAAAATTGATGGAGAGAAATGCTTCCGGATATGCAGAGCTCATTGAACAATCGCCAAAAGGAAAGATCTCTTCTGGACCAAGCAGTGAGGAAGAAGCAAGCCTATCGAGAAGCTCATTTTCTAGTAGAATCAATTATAACAAAGCCAGTAGAAGCAGAAAGCGGGGTATGGTTCTTCCCTTTCAACCTCTATCCCTCACTTTTGACGAGATCAGATATTCTGTAGACATGCCCCAGGAAATGAAAAATCAAGGAGTTTTTGAGACTCGTCTTGAACTTTTGAAGGGTGTTAGTGGAGCTTTTTGGCCTGGAGTACTAACAGCTTTGATGGGTGTAAGTGGCGCTGGGAAGACAACTCTAATGGATGTTCTGGCTGGAAGAAAAACTGGCGGATATATTGAAGGAAGCATCACAATATCTGGATACCCAAAGAGACAAGAAACATTTGCTAGAATATCAGGATATTGTGAACAATTTGATATTCACTCACCTTATGTTACGGTCTACGAATCTTTACTATATTCTGCATGGCTTCGATTAGCCCCTCATGTTGATTCTTCAACTAGAAAGATGTTCATTGATGAAGTTATGGAGCTTGTGGAGCTTACTTCATTAAGAGAAGCACTTGTTGGACTGCCAGGCGAGACTGGACTTTCAACTGAGCAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTAGCCAACCCTTCAATAATTTTCATGGATGAGCCAACATCTGGTCTTGATGCCAGAGCAGCTGCAATTGTGATGAGAACTGTGAGAAACACAGTGGACACAGGACGTACAGTAGTTTGCACCATCCACCAACCAAGTATTGATATATTTGATGCCTTTGATGAGCTACTGCTTTTAAAAGTGGGAGGAGAGCAAATATATGCTGGTCCATTAGGTCGCCATTGTTCCCATCTAATCCAATACTTTGAGGCCATTCAAGGAGTGCCTAAGATCAGAGATGGTTATAATCCTGCAACCTGGATGCTGGAGGTTACATCAGCAGGAACAGAGGCAAATCTTAGGGTCAACTTCACCAATGTGTACAGAAACTCAGAACTATACCAGAGAAACAAACAAATGATTCAGGAGCTTAGTAGGCCTCCTCTAGATTCAAAAGATCTATACTTCGCTAATCAGTATGCACAACCATTTTTCCCACAATTTATGGCTTGCCTATGGAAACAGCATTTATCATATTGGCGAAACACATCATATACAGCAGTTAGACTTCTGTTTACAACGATCATTGCTATATTGTTTGGGATAATTTTTTGGGGCATTGGCTTGCACAGGAGAAAAGATCAAGACCTTTTCAATGCAATGGGATCAATGTATGCTGCAGTTACATTCATCGGGGTACAAAATGCTGCTTCAGTGCAGCCCCTAGTAGCCGTTGAGAGAACAGTCTTCTACAGAGAACGAGCAGCCGGAATGTACTCCGCTTTGCCATATGCTCTAGCACAGGTTATCATCGAGCTTCCCCATATCTTGATTCAGACTGTAATATACGGTATTATAGTATATGCCATGATGGGATTTGAGTGGAAGACATCAAAGCTCTTGTGGAATCTCTTCTTCATGTACTTCACCTTCTTATATTTTACATTCTATGGCATGATGACTATGGCCATCACTCCCAACCCCCACGTCGCGGGCGTAATGGCGAGCGCCTTCTACGCGATATGGAACCTGTTCTCAGGCTTCGTCATTCCCTTATCAAGAATACCCGTATGGTGGAAGTGGTACTATTGGATTTGCCCGGTTGCGTGGACCTTGTATGGATTGATTGTCTCCCAATATGGAGATGTAAGGGAGAAACTAGAGAGCGGCCAAACAGTAGAAGAATTTGTGGGGAGTTACTTCGGGTTTAAACATGAATTCTTGGGAGTTGTTGCAGTTGTGGTGGCTAGTTTCTCAGTCTTCTTCGCACTCATTTTCGTCTTCGGCATCAAGGCATTGAACTTCCAGAGAAGATGA 4371 0.4248 MERNEVSRVSSLREISRAESLRANGSQVWRSNSMEMFSASAREDDEEALKWAAIERLPTYLRIRRSILTNDEGNAKEIDIKQLGLTERKILLDRLLKFAEEDNEQFLLKLKQRMDRVGLEIPTIEVRFEHINVKAEVYVGSRALPTMFNFFVNVLEDFLNYLHIIPSPKKPLYILQNVSGIIKPQRMTLLLGPPGSGKTTLLLALAGKLSKDLKYSGRVTYNGHGLDEFVPQRTSAYISQDDIHVGEMTVRETLSFSARCQGVGQNYEMLAELLRREKEAKIKPDPDIDAYMKAAALEGQETSVVTDYILKILGLELCADIMVGDGMIRGISGGQKKRVTTGEMLVGPVRVLFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYHGPREKVLDFFESMGFKCPERKGVADFLQEVTSRKDQWQYWARKDEPYSFVTVKDFVEAFQSFHVGHVLGEELANPFDKTKCHPASLSTKKYGVSKKELLRACVGREFLLMKRNSFVYIFKLTLLSYLAITTATLFLRTKMHKNTVADGGTYMGALFFAIIVAMFNGISELNMTIMKLPVFYKQRDLHFYPSWAYSLPPWILKIPFSLVEVAIWEVITYYVIGFDPDITRFFKQYLLLLCLNQMASALFRLMAALGRDIVVANTAGAFALLVIMVLGGFVISREDVHKWFLWGYWSSPLMYAQNAIAVNEFLGHRWRKLIVDGNETLGVMVLKARGFFPETYWYWIGIGALIGYTFLFNFIYTSALQYLSPFRKAQAGLSHEKLMERNASGYAELIEQSPKGKISSGPSSEEEASLSRSSFSSRINYNKASRSRKRGMVLPFQPLSLTFDEIRYSVDMPQEMKNQGVFETRLELLKGVSGAFWPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSITISGYPKRQETFARISGYCEQFDIHSPYVTVYESLLYSAWLRLAPHVDSSTRKMFIDEVMELVELTSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKVGGEQIYAGPLGRHCSHLIQYFEAIQGVPKIRDGYNPATWMLEVTSAGTEANLRVNFTNVYRNSELYQRNKQMIQELSRPPLDSKDLYFANQYAQPFFPQFMACLWKQHLSYWRNTSYTAVRLLFTTIIAILFGIIFWGIGLHRRKDQDLFNAMGSMYAAVTFIGVQNAASVQPLVAVERTVFYRERAAGMYSALPYALAQVIIELPHILIQTVIYGIIVYAMMGFEWKTSKLLWNLFFMYFTFLYFTFYGMMTMAITPNPHVAGVMASAFYAIWNLFSGFVIPLSRIPVWWKWYYWICPVAWTLYGLIVSQYGDVREKLESGQTVEEFVGSYFGFKHEFLGVVAVVVASFSVFFALIFVFGIKALNFQRR 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0978 1456 Pfam ABC-2 type transporter 390 440 IPR043926 GO:0140359
Prci2g0978 1456 CDD ABCG_PDR_domain2 856 1094 IPR034003 -
Prci2g0978 1456 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 10 1456 - -
Prci2g0978 1456 Pfam ABC transporter 175 357 IPR003439 GO:0005524
Prci2g0978 1456 Gene3D - 162 466 IPR027417 -
Prci2g0978 1456 FunFam ABC transporter G family member 40 873 1103 - -
Prci2g0978 1456 CDD ABCG_PDR_domain1 172 414 IPR034001 -
Prci2g0978 1456 Pfam ABC-transporter N-terminal 93 150 IPR029481 -
Prci2g0978 1456 Pfam ABC transporter 887 1039 IPR003439 GO:0005524
Prci2g0978 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 881 1097 IPR027417 -
Prci2g0978 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 432 IPR027417 -
Prci2g0978 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 859 1111 IPR003439 GO:0005524
Prci2g0978 1456 Pfam ABC-2 type transporter 511 723 IPR013525 GO:0016020|GO:0140359
Prci2g0978 1456 Pfam ABC-2 type transporter 1185 1398 IPR013525 GO:0016020|GO:0140359
Prci2g0978 1456 Pfam Plant PDR ABC transporter associated 728 789 IPR013581 -
Prci2g0978 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 159 432 IPR003439 GO:0005524
Prci2g0978 1456 FunFam ABC transporter G family member 34 162 466 - -
Prci2g0978 1456 Gene3D - 873 1108 IPR027417 -
Prci2g0978 1456 SMART AAA_5 184 409 IPR003593 GO:0016887
Prci2g0978 1456 SMART AAA_5 896 1088 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0978 Prci-Chr2 7236361 7243546 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0978 K08711 - gmx:100810505 2387.45