Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0721 ATGTTCAATCCCAAGCAGCCATCTTCTTCGTGTCCAGCACAAACCCATCATCTCATAACTAGCCACAAGATCATGGATCCTCCTGATGAGCTTCACAGATGGCCAACTCTTACTCAGGTGGTGTCAGAAATAAAAGCCATAGGGAAGATATCAGGCCCAACAGCCATAACTGGTTTGCTTATGTACTCGAGGGCTATGATATCTATGCTTTTCCTCGGCTATCTAGGCGAGATGGAGCTCGCAGGAGGCTCTCTCTCTATAGGTTTCGCCAACATCACTGGCTACTCTGTCATCTCTGGATTGGCAATGGGAATGGAACCCATTTGTGGACAGGCTTACGGCGCTAAGCAAGGCAAGCTCCTCGGCCTCACCCTCCAAAGAACCGTCCTCCTCCTCCTCTCCGCTTGCATCCCTATCTCCTTCATGTGGCTCAACATAAAGTCCATCCTCTTGTGGTGTGGTCAAGATGAGGCCATATCCTCAATCGCACAAAGTTTCATTTCTTTCTCCATTCCTGACCTCTTCTTTCTTTCCCTTCTCCACCCTCTCCGAGTCTTTCTCAGAACCCAGAGCATCACTTGGCCCTTGACTTATTGCTCGGCCGTCTCTGTTCTCCTGCACGTCCCGTTAAATTTCCTCTTGGTTGTTCACTTCAAGATGGGCATTGCTGGTGTGGCCATAGCCATGGCCTGGACCAACCTTAATCTCTTCCTTTTCATCTGTTCCTTTGTCTACTTCTCCAATGTTTGCAAGGACTCGTGGGTCCCTCTGAGCATTGACTGTCTCAAGGGCTGGTCTTCTATTCTTGCTCTGGCGGTGCCGACCTGTGTCTCTGTGTGTCTCGAATGGTGGTGGTACGAGCTCATGATAATGCTGTGCGGCCTCCTGGGCAACCCCAAAGCCACCATTGCATCCATGGGAATTCTGATCCAAACAACATCTCTAGTCTATGTCTTCCCATCATCCTTAAGCCTCGGCGTTTCCACGAGAGTGGGAAACGAGCTCGGCGCGAATCGCCCGGGAAAAGCCCGCATTTCCATGATCGTCTCACTCTTCTGCGCCGTTGGCTTGGGCCTGGGGGCCATGGGCTTCGCCACCGTAATGAGGCATCAGTGGGGGAGATTCTTCACCGGCGACGAAGAAATCCTGAAGCTCACCGCCATCGCATTGCCTATTGCCGGCCTCTGCGAGCTAGGAAACTGCCCACAGACCATCGGGTGTGGAGTTCTGAGAGGCAGCGCCAGACCCACCATTGGAGCTAACATCAATTTGGGTTCGTTTTACCTGGTGGGCATGCCGGTGGCGATCCTTTTAGGGTTCATCCGAAAGCTGGGTTTTGCCGGGCTGTGGCTCGGGTTGCTTGCCGCTCAAGCCTCGTGTGCCTGCCTCATGCTGATTGTTCTTTGCAGAACAGATTGGAATGTGCTCGCAGAAAGAGCAAGAGAGCTAACTTCAACTGATGCTGGTGCCAAGTCTGGCTCATTGCCTACGTTCACAAAAACAGAGTGTAACAGAAAGGATTCACTTAAAGACATAGTGATCAGTGATCCAGCCTCTCTTGAATCACAACCCCTCATCATGCCCGTTGCCCAACCTTCAACATGA 1605 0.5171 MFNPKQPSSSCPAQTHHLITSHKIMDPPDELHRWPTLTQVVSEIKAIGKISGPTAITGLLMYSRAMISMLFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQGKLLGLTLQRTVLLLLSACIPISFMWLNIKSILLWCGQDEAISSIAQSFISFSIPDLFFLSLLHPLRVFLRTQSITWPLTYCSAVSVLLHVPLNFLLVVHFKMGIAGVAIAMAWTNLNLFLFICSFVYFSNVCKDSWVPLSIDCLKGWSSILALAVPTCVSVCLEWWWYELMIMLCGLLGNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPGKARISMIVSLFCAVGLGLGAMGFATVMRHQWGRFFTGDEEILKLTAIALPIAGLCELGNCPQTIGCGVLRGSARPTIGANINLGSFYLVGMPVAILLGFIRKLGFAGLWLGLLAAQASCACLMLIVLCRTDWNVLAERARELTSTDAGAKSGSLPTFTKTECNRKDSLKDIVISDPASLESQPLIMPVAQPST 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0721 534 CDD MATE_eukaryotic 43 479 IPR045069 GO:0042910|GO:1990961
Prci2g0721 534 PANTHER MULTIDRUG RESISTANCE PROTEIN 39 473 - -
Prci2g0721 534 NCBIfam MATE family efflux transporter 56 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci2g0721 534 Pfam MatE 274 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci2g0721 534 Pfam MatE 53 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0721 Prci-Chr2 5424607 5426819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0721 K03327 - rcu:8288072 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0721 2 5424607 5426819 Prci2g0721 2 5424607 5426819 ECH