Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0615 ATGAGGGTTAACCAGGTTGAGGCCCCCCGAGACGAGCACGGATCGTCGATCCTGGATCTTGCCAGGGCCGACATCACCGAATCATCCACCAAAACTAGAAACTGTGCTGCTTGTCCTGGCTCTGGGTCTGGGTCAATGGAGTTTCAGTCGCCATACCCAGACCAAGTCCTCGAGAATGTCCTGGAGAACGTCCTCCACTTCCTCACGGCGCGCCGCGACCGCAACGCTGCCTCATTGGTCTGCAAGTCGTGGTACCGTGCTGAGGCCCTCACCCGATCCGAACTCTTCATCGGTAATTGCTATGCGGTGTTGCCGCGCCGCGCCACCGCCCGCTTTACTCGGGTTCGTTCCGTCGCAATTAAAGGGAAGCCGAGGTTCGCAGACTTCGATCTGATGCCGCTCAACTGGGGGGCCCACTTTTCGCCGTGGGTCGCTGCCATGGCCACGGCTTATCCTTGGCTGGAGAAGGTTTATCTGAAGCGCATGTCTGTGACGGACGAGGATCTGGTTCTTCTCTCTGAATCGTTCCCCGGCTTCAAAGAGCTTGTCCTTGTATGCTGCGAAGGGTTTGGGACCAGTGGACTTGCCGCCGTTGCCAGCAGATGCAGACAGCTGAGAGCACTTGATCTTGTTGAATCGGAGGTCGAGGACGATGAAGTGGAATGGCTATCATGTTTTCCAGACAATCAAACACATTTGGAATCTCTTGTTTTCGATTGCTTACAGTTCCCTGTTAATTTCGATGCATTGGAGAGACTTGTGGCTAGGTCACCTTCGTTAAAGAAACTTAGGTTGAATGGATTTGCTACCATCTCTCAGCTTTACCGCCTGATTATTCGAGCGCCACAGCTCACTCATCTTGGAACAGGTTCATTCAGTGCATCAGAGGCTGTAGCTGCCGGTGATCAGGAACCAGATTATGCCTCTGCATTTGCAGCTTGTAAATCCTTGGTTTGTCTATCTGGATTCAGGGATATTTTCCCAGATTACCTGCCTGCAATCTATCAAGTTTGTCCCAATCTCACATCTTTGAATTTCAGCTATGCCAATATTAATGCTGAACAACTGAAATCTGTCATTTGCCACTGTCATAAACTGCGGACATTATGGGTCCTTGATTCAATATGTGATGAAGGCCTTCAAGCAGTGGCTGCAACTTGCAGGGATCTTCGTGAGCTTCGAGTTTTTCCTGAAAATGCTAATGAGCATGCTGAGGGGACAGTTTCCGAGGTGGGCCTTCAAGCAATTTCTGAAGGTTGTAATAAATTACAATCAATTTTGTATTTCTGCCGAAGAATGACAAATGCAGCTGTAGTAGCCATGTCAAAGAATTGCCCAGATCTAGTAGTATTTCGTCTTTGCATCATTGGGCGATACCTGCCAGATGCGGTGACTGGGGAGCCCATGGATGAGGGTTTTGGTGCTATTGTTATGAATTGTAAGAAGCTCACTCGACTTGCTGTATCTGGTTTGCTGACTGACCGAGCTTTTGGTTACATTGGGAAATATGGGAAGTTGGTTAGGACACTGTCAGTTGCTTTTGCCGGTGACACTGACATGGGGCTTAAATATGTTCTAGAGGGATGCCATAATCTGCAAAAACTTGAAATCAGGGATAGTCCATTTGGGGATGAAGCTTTACATTCTGGTTTGCATCATTATTACAACATGAGGTTTGTCTGGATGTCATCTTGTAAACTGACTCGCCATGCTTGCCAAGAAGTCGCACGGGCACTGCCTCATCTGGTGGTGGAAGTGATTAGAAGTGAAGAGAGAAATGCTGATGATACTGTTGAGATATTATACATGTATCGATCCCTTGATGGACCAAGAGATGATGCTCCCAAATTTGTCACCATCATGCAGTAG 1869 0.4837 MRVNQVEAPRDEHGSSILDLARADITESSTKTRNCAACPGSGSGSMEFQSPYPDQVLENVLENVLHFLTARRDRNAASLVCKSWYRAEALTRSELFIGNCYAVLPRRATARFTRVRSVAIKGKPRFADFDLMPLNWGAHFSPWVAAMATAYPWLEKVYLKRMSVTDEDLVLLSESFPGFKELVLVCCEGFGTSGLAAVASRCRQLRALDLVESEVEDDEVEWLSCFPDNQTHLESLVFDCLQFPVNFDALERLVARSPSLKKLRLNGFATISQLYRLIIRAPQLTHLGTGSFSASEAVAAGDQEPDYASAFAACKSLVCLSGFRDIFPDYLPAIYQVCPNLTSLNFSYANINAEQLKSVICHCHKLRTLWVLDSICDEGLQAVAATCRDLRELRVFPENANEHAEGTVSEVGLQAISEGCNKLQSILYFCRRMTNAAVVAMSKNCPDLVVFRLCIIGRYLPDAVTGEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFGYIGKYGKLVRTLSVAFAGDTDMGLKYVLEGCHNLQKLEIRDSPFGDEALHSGLHHYYNMRFVWMSSCKLTRHACQEVARALPHLVVEVIRSEERNADDTVEILYMYRSLDGPRDDAPKFVTIMQ 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0615 622 SMART LRR_CC_2 480 503 IPR006553 -
Prci2g0615 622 SMART LRR_CC_2 529 553 IPR006553 -
Prci2g0615 622 SMART LRR_CC_2 176 201 IPR006553 -
Prci2g0615 622 SMART LRR_CC_2 363 386 IPR006553 -
Prci2g0615 622 SMART LRR_CC_2 420 444 IPR006553 -
Prci2g0615 622 Pfam F-box 54 93 IPR041567 -
Prci2g0615 622 Gene3D - 47 92 - -
Prci2g0615 622 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 162 585 - -
Prci2g0615 622 FunFam Transport inhibitor response 1-like protein 47 92 - -
Prci2g0615 622 Gene3D Ribonuclease Inhibitor 94 621 IPR032675 -
Prci2g0615 622 FunFam Transport inhibitor response 1 93 621 - -
Prci2g0615 622 Pfam Transport inhibitor response 1 protein domain 114 159 IPR041101 -
Prci2g0615 622 SUPERFAMILY RNI-like 105 583 - -
Prci2g0615 622 SUPERFAMILY F-box domain 53 87 IPR036047 GO:0005515
Prci2g0615 622 CDD F-box_AtTIR1-like 54 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0615 Prci-Chr2 4483747 4487220 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0615 - - qsa:O6P43_019587 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0615 2 4483747 4487220 Prci2g0615 2 4483747 4487220 ECH