Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0588 ATGGCACTCTCCAACGTCTTGATTCTATGTGCATTCGTAGCTATCAACATGGCCCTGCCGGCGCTGGCCAAAGTCTACACCGTTGGAGAGTCATCTGGCTGGATGATCGGTGCTGATTATGGGACCTGGGCTAGTGGCAAAACCTTTCAAGTTGGTGATTCTCTCGTGTTCAACTATGGAGCGGGGCACACAGTAGACGAAGTTAAAGAGAGTGACTACAAATCCTGCACCACTGGTAATTCACTTACTTCCGACAGCAGTGGAGCCACCACCATTACCCTTAAGACCGCCGGATCTCACTACTTCATATGTGCGATTCCTGGACATTGCAGTGGTGGCATGAAGCTTGCCGTTGATGTTAAGGCCGGAAAAGCCTCCTCTCCTACTGCAACGCCTTCCTCCGGTAAGGGCTCGCCTTCCGGTGATACCCCAACCACCACCACCCCCTCCTCCTCCTCCTCCACCACCTCCTCCACCACTCCATCCACTACGGCCCATTCTTCTTCAGCCGCTAGCTCTTCACCCATTGTTGCTATCATGACCGCTTCTTGGGTTTTATACTGTGTGACGCGCCTGCTATGA 582 0.5309 MALSNVLILCAFVAINMALPALAKVYTVGESSGWMIGADYGTWASGKTFQVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSLTSDSSGATTITLKTAGSHYFICAIPGHCSGGMKLAVDVKAGKASSPTATPSSGKGSPSGDTPTTTTPSSSSSTTSSTTPSTTAHSSSAASSSPIVAIMTASWVLYCVTRLL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0588 193 PANTHER BLUE COPPER PROTEIN 23 153 IPR039391 GO:0009055
Prci2g0588 193 Gene3D - 22 127 IPR008972 -
Prci2g0588 193 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Prci2g0588 193 MobiDBLite consensus disorder prediction 125 170 - -
Prci2g0588 193 CDD Phytocyanin 24 120 - -
Prci2g0588 193 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Prci2g0588 193 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Prci2g0588 193 MobiDBLite consensus disorder prediction 126 170 - -
Prci2g0588 193 FunFam Blue copper 22 126 - -
Prci2g0588 193 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0588 34 120 Miscellaneous Gene Families AT1G22480 71.264 1.34e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0588 - - gmx:100306522 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0588 2 4322826 4323842 Prci2g0588 2 4322826 4323842 ECH