Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0584 ATGCAGAGGCGCAGGTGGATTCCGTTGGTTCTCTTACGGAAGTTGCTTACTGCAGCTATTTGCTCGATTGCGCTTGTGGCGCTCTTCTCTGTCCATTTTCGCGTTGTCCCCTCTTCGAAAGATCAAAAGTTCAATGACAAGATTTCCACGCCTCGTGATTGGCAAAGCTGGACGAGAGAGCTCGCTCCGCCCCATTTATCCAAATCCAAGGCTCCACTCCCTACTCCCAAGTTAAATCATCTGGGAGGGGATTCAAACTATGACAAACTGTGGAAGCCTCCTTCAAATCGTGGGTTTCTTCCCTGCATAAGTCCTACGGCTAATTACACAACTCCAGCCAAGTCGCGAGGTTACCTACTTGTTCACACAAATGGTGGACTCAACCAAATGCGTGCTGGGATATGTGATATGGTAGCTGTAGCTCGTATCATAAATGCGACTCTTGTAATTCCAGAACTTGATAAGAAGTCATTTTGGCATGACAGTAGCAATTTCTCAGATATTTTTGATGAAGAGCATTTTATAAAGTCTCTAGCTAATGATGTAGAGATCATTAAGAAGCTTCCAAAAGAACTGGTTAATGTTACCAGAATAGTCAAGCATTTCAGAAGTTGGTCTGGCATGGATTACTATGAGAATGAGATTGCCAGCTTGTGGGAAGAATATCAAGTTATTCGAGCTGCCAAGTCTGATTCCCGGTTGGCAAACAACCGTTTACCTCCAGATATTCAGAAGCTTCGTTGCCGTGCTTGTTATGGAGCTCTTCGTTTTTCTCCGCTTATTGAACAAATGGGAAAATTATTGGTGGGGAGGATGAGGTCATTTGGTCCCTACATAGCATTGCATTTAAGATATGAGAAGGATATGCTGGCATTTAGTGGGTGCACACATAATTTATCTCCAGCTGAGGCTGATGAGCTACGAATGATCAGAGAGAACACTTCCCATTGGAAGATAAAGGATATTGATCCCAGAGAACAGAGGTCCAAAGGGTTTTGCCCATTGACTCCAAAGGAAGTTGGAATATTTCTTACTGCTCTTGGATACCCATCAAAGACTCCAATATATATTGCTGCTGGGGAGATATATGGGGGTGAATCCCGCATGGCAGAATTGCATTCCCGCTATCCATTGTTAATGAGCAAGGAAAAATTGGCATCCACTGAGGAGCTTGAACCTTTTTTAAGACACGGTTCTCAGATGGCTGCTCTTGACTATATAGTATCTATTGAAAGTGATGTATTTATACCCTCTTACTCTGGAAATATGGCAAGGGCTGTTGAAGGTCATCGCCGTTTTCTAGGACGTGGCAGAACAATATCTCCAGATAGGAAAGCACTTGTTCGTCTGTTTGATAAACTGGATCTGGGAATGATAACTGAGGGGAACACTCTATCCAAAAAGGTTATTGATCTCCACAGGAGACGACTTGGGTCACCCAGAAAGAGAAAAGGGCCAATTTCTGGGACGAAGGGTATGGATAGATTTCGATCAGAAGAAGCTTTTTATGCTAATCCTTTACCAGATTGTTTATGTCAGACAGAGTTACCAGTTATAAACTCCTCCCACCTAGATTCTTAG 1581 0.4326 MQRRRWIPLVLLRKLLTAAICSIALVALFSVHFRVVPSSKDQKFNDKISTPRDWQSWTRELAPPHLSKSKAPLPTPKLNHLGGDSNYDKLWKPPSNRGFLPCISPTANYTTPAKSRGYLLVHTNGGLNQMRAGICDMVAVARIINATLVIPELDKKSFWHDSSNFSDIFDEEHFIKSLANDVEIIKKLPKELVNVTRIVKHFRSWSGMDYYENEIASLWEEYQVIRAAKSDSRLANNRLPPDIQKLRCRACYGALRFSPLIEQMGKLLVGRMRSFGPYIALHLRYEKDMLAFSGCTHNLSPAEADELRMIRENTSHWKIKDIDPREQRSKGFCPLTPKEVGIFLTALGYPSKTPIYIAAGEIYGGESRMAELHSRYPLLMSKEKLASTEELEPFLRHGSQMAALDYIVSIESDVFIPSYSGNMARAVEGHRRFLGRGRTISPDRKALVRLFDKLDLGMITEGNTLSKKVIDLHRRRLGSPRKRKGPISGTKGMDRFRSEEAFYANPLPDCLCQTELPVINSSHLDS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0584 526 FunFam O-fucosyltransferase 28 249 443 - -
Prci2g0584 526 Pfam GDP-fucose protein O-fucosyltransferase 118 433 IPR019378 -
Prci2g0584 526 PIRSF UCP009360 1 516 IPR024709 -
Prci2g0584 526 CDD O-FucT_plant 118 439 IPR024709 -
Prci2g0584 526 PANTHER OS02G0726500 PROTEIN-RELATED 13 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0584 Prci-Chr2 4252941 4260071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0584 60 515 Miscellaneous Gene Families AT1G22460 69.737 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0584 - - gmx:100800040 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0584 2 4252941 4260071 Prci2g0584 2 4252941 4260071 ECH