Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0554 ATGCAGAAGCTAGGACTCACCAGCTCGAAGAGTCTGGACAAATTCAAATCACTGTATGGTCCCGCATCCGGAACTGCGAAGGCTTCGTCGTTCACTTCTCGTCCTTCCGCAGATGCCATCTCATTGGGAAGTTTTGCGAATCTGAAGCTCACCGCAGAGAAACTTGTGAAAGAGCAAGCTTCGGCGAGGACTGATCTGGAAATGGCGAATACTAAACTAAAGAAGTCCCTGGAGCATGTTCATGCTCTAGAAGAAAAACTTCAGAATGCTTTTAACGAAAATGCCAAACTCAAGGTCAAGCAGAAAGAAGATGAAAAACTTTGGAAAGGATTGGAGTCTAAATTCTCATCAACGAAGACATTGTGTGATCAACTTACTGAGACTCTGCAGCAGCTATCAGGTCTAGTTCAGTCCGCTGAGAAAGATAAGGAGATATTGGAAATTAAACTTTCAGCAAGTTCAGAGGCTCTTGGTAGTTTGAATAAGCATATGGATGATCTGTCTCTGAAGCTAGATTCTGCAGAGGAAACAATTAGAACTCGTGACAAGGAGATAGAAGAGCTCAAATCTGAGTCAGTGGCAAAGGACGAGATTCATAGAGATGATCAGGCTAGATCTGCCAATCTCTTAAAGCAGAAAGATAGTATGATCAAGAGTTTAGATGAAACTTTAGCAGCTAGTAAAATGGCTTCAGAGAGTCTGAATTCAAAGTTGGGAGAGGCGCAACTTCAGTTAGAAGTCAAAGAAGATGAAATTACTCATCACATCACCACTGGGGAAAAACTGAAGAAAGAAATGGGTGATCTTCAATTGTATAACGCTGAGATTACTAAAAAGCTTGACATGTCACTTCAGAAAATCAAAGACCTTGATGAATTGGTTCAAGCCCTGACTGCAAATGTGGTTGGATTAGACAAAGAAAGCTTGAACCTTTTGAGCAAGTTTGATGAACTAAATTGTCTGTATGATTCTTACTTCCATTTGGTCCAGCATGAACGAGATGCCTTATCTAAGCATGCTCAAGCTCAATATGATGAGCTTCATAATAAATTCATGATCTTGAGATCAGAAAAAGGTGCAATTCAATTGAAAAATCATGAGTTAAACGATAAAGTGACTGAACTTCAGGAAGTCCTGGAATCAATGGCAACCCAGCATGAAGATGAATACCGATTAGCTGCTGAAAGAATTCAGTGTCTGGAGTCAGAAGCTCAAACCTTAATCTCAAACAAGGAAGAAGCTGAGCTATCAATTTCCAAATTAGAGGAGAAAGTTGAATTTTTTTCAGAAAGTTCTAGATCATTAGAGAACCAGATGCAAGGTTTATTGCTGAAGTTTTCAGCCTTAGAAAATGAAAGCAAAGAAAATTCAGACAGATTGCAGGAAGAAATATTGAAGAAATCAAAGGAAATAGATAGTTTGAAAAAGGAAGTGGTAAAACTTGAGCAGCATGCAGATTTTCTGGAGAAACAAGTAGGTGAAGTTAATAATGTCTTGGAGGACAAGGAACGGCTTATTTTGTGGTACAAGGAGCAAGAAAAGAAGCTGGAAGATCAGATCACAGAGAACCGGACATCATTGGCTGCTATTGAAAATAAACTTTTAGAAGCTAAGAAGCAGTATGATCTAATGGTAGAGAGCAAGCAGTCAGAATTATCGAGGCATTTGAAAGAGATTTCTCAGAGAAATGATCAGGCTATTAATGACATTAAGAGGAGGTACGAGTTGGAGAAGATGGAAATTGCCAACATGGAAAAAGACAAGGCTGACAAGGCTATTGCAGAAATAGAGGGAAAATGTGACCAAAAACTTGCAGATTGCAAAGAAGAGTCAAGCCAACGGTTGATGCGCATTCAGGAGGAGCACGCTTCACTGGTTAGTCAGATACAGCAGGAGCACAACAAGAAGCAACAAGATCTTATAGCTGAACACAGTGAGAAGCTAAAGCATGTCCAACTGCAAGCTGAAAATGAAATGAGAGAGAAAACATTGTTCCTGAGGAATGAACAAGAAGCTCAGATGAAATCATTGAGGTGTGAACTTGAAGATGAGTGTCAGAAGCTGCAAGAGGAGTTGCATATCCAAAAATCAAAAGAAGATAGGCAAAGAGCTTTATTGCAATTGCAGTGGAAAGTGATGAGTGACAAACCAAAAGAAGACCAAGAAGTGAATTCAAAACAGGATTACCCTGCTCCCTCAATTAAGAGGAGGAGCTCTCGTGGTGGCCAACATAGTCAACAAGCCTTAGACTCTCCTTTCCTTGAAGTAAGACAAACACCAGTCTCAAAATTGTTACACAAAGTGGAGAATGCTAAGGCAGGAAGTACGATGAGCATTCCTCAGCATCACAGAAAGGTGACTCACCATGAATATGAAGTTGAGACTTCCAATGGAAGAACCGTTACAAAGCGAAGAAAAACAAGAAGTACTGTCATGTTTGAGGATCCAAGAAAGCATAAGATTAAAACACCAAAAGCAAACATGCCTGGAAGTTTTGTCAAGGGCACGAAGGGAGGAGGACATGTTCCTCCTTCAAATATTGGTGATTTGTTTTCAGAAGGTTCTCTAAATCCCTATGCGGATGACCCCTATGCATTTGATTAG 2604 0.4013 MQKLGLTSSKSLDKFKSLYGPASGTAKASSFTSRPSADAISLGSFANLKLTAEKLVKEQASARTDLEMANTKLKKSLEHVHALEEKLQNAFNENAKLKVKQKEDEKLWKGLESKFSSTKTLCDQLTETLQQLSGLVQSAEKDKEILEIKLSASSEALGSLNKHMDDLSLKLDSAEETIRTRDKEIEELKSESVAKDEIHRDDQARSANLLKQKDSMIKSLDETLAASKMASESLNSKLGEAQLQLEVKEDEITHHITTGEKLKKEMGDLQLYNAEITKKLDMSLQKIKDLDELVQALTANVVGLDKESLNLLSKFDELNCLYDSYFHLVQHERDALSKHAQAQYDELHNKFMILRSEKGAIQLKNHELNDKVTELQEVLESMATQHEDEYRLAAERIQCLESEAQTLISNKEEAELSISKLEEKVEFFSESSRSLENQMQGLLLKFSALENESKENSDRLQEEILKKSKEIDSLKKEVVKLEQHADFLEKQVGEVNNVLEDKERLILWYKEQEKKLEDQITENRTSLAAIENKLLEAKKQYDLMVESKQSELSRHLKEISQRNDQAINDIKRRYELEKMEIANMEKDKADKAIAEIEGKCDQKLADCKEESSQRLMRIQEEHASLVSQIQQEHNKKQQDLIAEHSEKLKHVQLQAENEMREKTLFLRNEQEAQMKSLRCELEDECQKLQEELHIQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYPAPSIKRRSSRGGQHSQQALDSPFLEVRQTPVSKLLHKVENAKAGSTMSIPQHHRKVTHHEYEVETSNGRTVTKRRKTRSTVMFEDPRKHKIKTPKANMPGSFVKGTKGGGHVPPSNIGDLFSEGSLNPYADDPYAFD 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0554 867 Coils Coil 567 599 - -
Prci2g0554 867 Coils Coil 66 100 - -
Prci2g0554 867 MobiDBLite consensus disorder prediction 726 753 - -
Prci2g0554 867 MobiDBLite consensus disorder prediction 815 867 - -
Prci2g0554 867 Coils Coil 122 191 - -
Prci2g0554 867 Coils Coil 667 687 - -
Prci2g0554 867 Coils Coil 365 547 - -
Prci2g0554 867 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 37 799 - -
Prci2g0554 867 MobiDBLite consensus disorder prediction 715 753 - -
Prci2g0554 867 Coils Coil 280 307 - -
Prci2g0554 867 Coils Coil 634 661 - -
Prci2g0554 867 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0554 Prci-Chr2 4045444 4053938 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0554 - - gmx:100788684 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0554 2 4045444 4053938 Prci2g0554 2 4045444 4053938 ECH