Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0510 ATGGGTTCTTTTTTTAGTATGGCAAGTACCAAATTCGATAGAAGTGAGGGTGATGAGGTCTTTCAGAATGAGATCTGCAAGAGGAGAAGAATGTCATCTAGCTTTGATGAGGAGAGTCCAAGGTTAATTCCAAATCTTCCTGATGAATTGTCACTTCAGATTATCGCCAGAGTTCCTAGGATTTGCCACTTCAACATGAGGTTGGTGTCGAGGAAGTGGAAGGACACTATCGTGAGTTCTGAACTATATAAATTAAGAAAAGAACTTGGAACAACGGAAGAGTGGCTATATCTGTTGATTAATGTTGGAGAAAATAAGCTTATATGGCATGCCTTAGACCCTCGTTCCCAAAAATGGCAGAGACTGCCTGCTATGCCTAATTCTGTTAATGAAGAAGACTCTAGAAAGGGTTCTTCTAGGCCTCGGATGTGGAACATGGTGGAAGGTATTAGAATTGCTGAAGTTATTAGAGGTTTGCTGGGACTGAAGGGTGCATTAGATGAAATGCCTTTTTGCGGTTGTGCCATTGGAGCTGTTGAGGGATGTCTCTATGTTCTAGGCGGATTCTCTAAATCTTCAACTATGAGATGTGTTTGGCGATATGATCCGATACAAAACACATGGGCCAAGGTGACCTCCATGTCTACAGGTAGGGCATATTGTAAGACAGGCATCTTAAACAACAAGCTTTATGTGGTTGGAGGGGTTAGTCAAGGTCAAGCTGGGTTGATTCCTCTTCAGTCTGCTGAAGTTTTTGATCCCTCTACAGATGCATGGTAA 780 0.4231 MGSFFSMASTKFDRSEGDEVFQNEICKRRRMSSSFDEESPRLIPNLPDELSLQIIARVPRICHFNMRLVSRKWKDTIVSSELYKLRKELGTTEEWLYLLINVGENKLIWHALDPRSQKWQRLPAMPNSVNEEDSRKGSSRPRMWNMVEGIRIAEVIRGLLGLKGALDEMPFCGCAIGAVEGCLYVLGGFSKSSTMRCVWRYDPIQNTWAKVTSMSTGRAYCKTGILNNKLYVVGGVSQGQAGLIPLQSAEVFDPSTDAW 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0510 259 SUPERFAMILY Kelch motif 97 259 IPR015915 GO:0005515
Prci2g0510 259 SMART fbox_2 46 86 IPR001810 GO:0005515
Prci2g0510 259 Gene3D - 41 96 - -
Prci2g0510 259 Gene3D - 105 259 IPR015915 GO:0005515
Prci2g0510 259 SUPERFAMILY F-box domain 39 93 IPR036047 GO:0005515
Prci2g0510 259 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Prci2g0510 259 PANTHER OS02G0202900 PROTEIN 28 259 IPR045887 -
Prci2g0510 259 Pfam Kelch motif 218 259 IPR006652 GO:0005515
Prci2g0510 259 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Prci2g0510 259 SMART kelc_smart 182 228 IPR006652 GO:0005515
Prci2g0510 259 Pfam F-box domain 44 83 IPR001810 GO:0005515
Prci2g0510 259 CDD F-box_AtAFR-like 42 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0510 Prci-Chr2 3719475 3721712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0510 36 259 Miscellaneous Gene Families AT4G33900 24.891 6.79e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0510 - - pcin:129299752 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0510 2 3719475 3721712 Prci2g0510 2 3719475 3721712 ECH