Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0507 ATGATGGCTTCAATCTGCATACCGCGCGCTGGTTCAGCACAGCCCACCACGGCTCTTCCCAGTTGGAAGTCTTTCAGAGAGAGGAAGACTGACTTTACAGGAATCCCTCGCAGTGTTCATATGGAGAACCTGCAGAACGAATATCTGTTTCCTGAGATATTCATGCGGGAATCTGAACATGCCAGGAAGAATCCACATGCGAGAGTACTTAGACTTGGTATTGGTGATACCACAGAACCAATTCCAAGTATGATAACTTCTACTATGGTTGAGAAAGCACTTGCTTTGTCAACAGTTCAAGGTTACAAGGGGTATGGACCAGAGCAAGGAAACGGGGATTTAAGGAAGGCAATAGCTGAAAGATTTTACCGGGATTCACTCGTGAAGGAGAATGAGGTTTTTATATCCGACGGCGCCCAGTGCGATATTTCACGCATTCAGATGCTGCTAGCATCCAGTTTGACAATGGCGGTGCAGGACCCAACTTTTCCGGCGTATGTGGATTCCAGCGTGATTGCTGGAAGAGCAGGCAGATTCCAAGCAGAAACTCTGAAGTACAGAAACATAGTGTACATGAAATGTGGACCCGAGAATAATTTTTTCCCAGACTTATCAGCTACTCCAAGGGCTGATGTTATTTTCTTCTGCTCTCCAAACAATCCGACCGGTAACGCAGCAACCCGCCAGCAGCTGAAGCAACTAGTGGATTTTGCGAAAGCAAATGGATCCATAATCATATATGACTCAGCCTATGCTTCTTTTATATCTGATGAAAGCCCGAGATCAATATTTGAAATCCCAGGAGCCGAAGAGGTAGCAATTGAAATTTCATCGTTCTCCAAATTTGCTGGTTTCACGGGGGTCCGCCTGGGCTGGACTGTTGTCCCCCAACAACTATTGTATTCCAATGGATATCCCGTGATCAAGGATTATAATCGCCTAGTGTGCACCAGCTTCAATGGTGCATCCAATATTGTTCAAGCGGGGGGACTTGCTTGCCTTTCTGATGAAGGTTTTCAGGCACTGGGCAATACTGTGAATTACTACAAGGAGAATGCGAAGATTCTGGTGGACACCTTTGAATCACTGGGGCTGAAGGTGTATGGAGGCAAGAACGCACCTTACGTGTGGGTGCATTTTCCGGGGAGAAATTCGTGGGACGTGTTCAACAAGATTCTCCAGAGAGCGGACATAGTCACCGTCCCGGGCATAGGATTTGGGCCTGGCGGCGAGGGGTTTATTAGAGTTAGTGCCTTTGGTCATAGAGACAGCATATTGGAAGCTTCAACGAGGCTGAGAAAATTTCTTTAG 1311 0.4683 MMASICIPRAGSAQPTTALPSWKSFRERKTDFTGIPRSVHMENLQNEYLFPEIFMRESEHARKNPHARVLRLGIGDTTEPIPSMITSTMVEKALALSTVQGYKGYGPEQGNGDLRKAIAERFYRDSLVKENEVFISDGAQCDISRIQMLLASSLTMAVQDPTFPAYVDSSVIAGRAGRFQAETLKYRNIVYMKCGPENNFFPDLSATPRADVIFFCSPNNPTGNAATRQQLKQLVDFAKANGSIIIYDSAYASFISDESPRSIFEIPGAEEVAIEISSFSKFAGFTGVRLGWTVVPQQLLYSNGYPVIKDYNRLVCTSFNGASNIVQAGGLACLSDEGFQALGNTVNYYKENAKILVDTFESLGLKVYGGKNAPYVWVHFPGRNSWDVFNKILQRADIVTVPGIGFGPGGEGFIRVSAFGHRDSILEASTRLRKFL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0507 436 Gene3D - 79 336 IPR015421 GO:0003824
Prci2g0507 436 CDD AAT_like 70 434 - -
Prci2g0507 436 Hamap LL-diaminopimelate aminotransferase [dapL]. 36 435 IPR019942 GO:0008483
Prci2g0507 436 Gene3D Aspartate Aminotransferase, domain 1 49 432 IPR015422 GO:0003824
Prci2g0507 436 Pfam Aminotransferase class I and II 69 422 IPR004839 GO:0009058|GO:0030170
Prci2g0507 436 SUPERFAMILY PLP-dependent transferases 47 432 IPR015424 -
Prci2g0507 436 NCBIfam LL-diaminopimelate aminotransferase 38 434 IPR019942 GO:0008483
Prci2g0507 436 FunFam LL-diaminopimelate aminotransferase, chloroplastic 79 336 - -
Prci2g0507 436 PANTHER AMINOTRANSFERASE 26 435 IPR019942 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0507 Prci-Chr2 3693705 3696940 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0507 K10206 - qsa:O6P43_019686 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0507 2 3693705 3696940 Prci2g0507 2 3693705 3696940 ECH