Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0459 ATGCAAAAGCCTTCTATAGTGGTATCTTGCAATTCTGGAAATGAGATACACGAGATACCATCAGAGTTCTCAGGAAACATCAGGGCGCCTACTCATGCCACTGCTTTGTCAAATGACCCTTCATTGAAGCAGCCGGAGATCAAGATTTGTTCCCCTAATGAGCAAGGTCTGTCCAGGACATCAGATGTTTCTTTCACCTTGATGCCACCTATACATTTCAACGGGCATCAAATGGACCCTCTGGATTTTCCAAACATTCAACCTAATGGTGAAGGTGTGTGCTCAAAACCATGTTCAGAGCCAGTTGGCTCTGCAGCAACTTATACAAACAAAGACCTGGTCCAGACTGGGGTTTGTGTGCAGAGAAATTATTATAGTCCTCACTGGTCAATGGAAACTGTGGTGAAGGCTTTAGAGAAGGGGGATGTTTTTAAAGCCCTTTTTCGTGTCAATGCTCACAATAGACTTGAGGCATATTGTAAAATTGATGGAGTGCCAACCGATGTTCTCATTAGTGGAATTCCTGCCCAGAATAGAGCTGTCGATGGTGATGTTGTTGCAGTTAAGATAGATCCTTTGGCTTTGTGGACTAAAATGAAAGGATCAAATGGTACTGGCAATGCTACTGCACCTCTTGAAACTTGTAATCTGGTTAGAGAAGATAATGAAGTGGAGGGGAATATATCTATTGAAAAAGGCAAAGGAGACTCTGATTCTGAGTTTGCTAATAACAGCAACTGCCCTGGTCAAGACAAGGAGGATGTTAATCGTGATCCCAGTACTTGTACAAGTAATCCTTATCCTGAAAAGAAATTGCTAAATAATAGTTATGTTTCTCCTGCTTCAACCAGCCCTTTTGAACCAGTTACTCATGATGGTCATGATGCTGCTTCTGATAACTTAAATATCAGTTCTTATAGTGCAGAAGGTGAAGTTATTAATGCTGTGGAAAACATGCGTTTGTTGGTTAACTCTTTCCCTTCTAAAAGACCAACTGGCAGGGTGGTTGCAATTGTTGAGAGGTCTCCACGCCGAGAGTCCATAATTGGTCATCTCAATGTTAAGCTGGCATTTTCTTTTAGAGACGTGTGCAGAAAAGATGCAAAGAAGAACAAAAAATTGGTTTCTGGCTGTGAGTATATCCAGTTGATGCCAACTGATCCAAAGTTTCCAAAAATGATGCTCCTTGTTAGGGATTTGCCCAACTCCATAAGGAAGAGGCTGCAAACTGGGGATGCTACACTTGAAATGGATCTGGTAGCTGCACAAATGGATAACTGGTCTCAAGAAAGTCCTTGCCCTCAAGCTCGCATCTTGCATATTTTTGGACGAGGTGGTGAAATTCAGCCACAATTAGATGCAATTTTGTTTGATAATAAAATCTCTGTGTCTGAATTTTCACCTGAAGCTTTGTCCTGCCTTCCATTTGTTTCTTGGGAGGTTCCACAGAAAGAATTTCAAAGTAGAATGGATCTTAGAAATTTGTGTATAGTTACCATTGATCCTTCAACTGCCTCTGATCTGGATGATGCATTGTCCATTGAGAAGTTATCTAATGGAAATTTTAGAGTAGGTATCCATATTGCTGATGTTTCGTACTTTGTCTTACCAAACACAACCATAGATAGTGAGGCTCAGTCTAGGTCAACAAGTATTTATATGGTGCAAAGAAAGTTATCAATGTTGCCAGCATCATTTTCGGAGAATATAGGTTCCCTTAATCCTGGAGTGGATCGACTTGCAGTTTCTATGCTCCTGGACATAAACCTTGATGGGGATGTATTAGATCGTTGGATTGGCCGTACTGTGATAAAATCTTGTTGTAAGCTTTCTTATGACCATGCACAGGACATTATTGATGGGGTTATTGATGTTGAAAGTTCAAACACTATAGGAGATCCCTATCCAAAGGTACATGGCCGTTTTGAATGGCCTGATGTTATCGCATCTGTGAAGAATCTATACCAAATTTCAAGAGTTTTGAAAAATAAAAGGTTTAATGATGGGGCTTTACGACTTGAAAGCCCCGAACTTGTTTTCCTGTTTGATGAGGATGGAATTCCTTATGATATTATGCTCTCAGATCGGAAAGAATCTAATTTTCTTGTCGAAGAATTTATGCTCTTGGCTAATAGGACAGCTGCTGAAGTCATTTGCAGAGCATATCCTGGTGGTGCATTACTGCGGAGGCATCCTGAACCTAATTTACGGAAGCTAAGAGAGTTTGAGGCATTTTGTAGCAAACATGGTTTAGAGCTGGACACATCTTCATCTGGTCGGTTCCATTGGTCGTTAGAGAAGATCAGGGAAAATCTCAAGGATGATCCTACACTTTGTGATATTCTTATTTCATATGCTACAAGGCCAATGCAGTTGGCACAATACTTCTGTAGTGGGGATTTAAAAGACAAACAAAATGATTGGGGCCATTATGCTTTGGCCATCTCTGCTTACACTCATGTTACTTCACCTCTGCGTCGGTATCCTGATATTGTTGTTCATCGTATGCTACTTGCTGTTATAGAGGCTGAGGAAATATATCTGGAGCATGAAAAGATGTTGCAGGTTACCAAGGGAGAGGAAGTGCGAGAAAGATATTTCACTGGTATGAACTTTGGTGAGGAAGTTGCTGAATCTGTGGAAGGGAGAAAAGCACTATTAGCTGCTGCTTTGAAGCATGGAGTTCCTTGTGCTGAATTACTTGCGGATGTTGCTGCTTATTGCAATGAGAGAAAGCTAGCTAGTAGAAATGTCAAGGATGCTTGTGATAAGCTTTACATGTGGGTTCTCCTCAAGAAGAAGGAGGTGTTATTGTCAGAAGCAAGAATATTGGGATTAGGCCCAAGGTTCATGTCAATTTATGTTCAAAAACTAGCTATCGAGCGGCGCGTATATTATGATGAAGTTCCAGGCTTGACTGTCGAATGGTTGGATGCGACCTCTACTTTGGTACTTAGCATGTGTACTGATAAACGTGCATTTCGGAGAGGCAGCCCTGGTAAATGGAGGGCATTTGAAGAAGTTGTCTTACTTGCTTGTCCATGTAACCTGAAAGACTCCAACGATGGTATTAATGAGAGTGACGCAGTGAAAATGGGAGATATGGATCTTAGTTCTAGATCGGACAGTTCAGGTACTGAAATTGATCCTGCAGTTTTCCCCCTCACTCTGCGTGTTCTTGCGACAGTTCCAGTAGCACTGCATGCCGTCGGTGGGGATGATGGACCCCTTGACATTGGGGTGAGGCTGTACATGAGTTCCTACTTAAGGTAA 3273 0.4161 MQKPSIVVSCNSGNEIHEIPSEFSGNIRAPTHATALSNDPSLKQPEIKICSPNEQGLSRTSDVSFTLMPPIHFNGHQMDPLDFPNIQPNGEGVCSKPCSEPVGSAATYTNKDLVQTGVCVQRNYYSPHWSMETVVKALEKGDVFKALFRVNAHNRLEAYCKIDGVPTDVLISGIPAQNRAVDGDVVAVKIDPLALWTKMKGSNGTGNATAPLETCNLVREDNEVEGNISIEKGKGDSDSEFANNSNCPGQDKEDVNRDPSTCTSNPYPEKKLLNNSYVSPASTSPFEPVTHDGHDAASDNLNISSYSAEGEVINAVENMRLLVNSFPSKRPTGRVVAIVERSPRRESIIGHLNVKLAFSFRDVCRKDAKKNKKLVSGCEYIQLMPTDPKFPKMMLLVRDLPNSIRKRLQTGDATLEMDLVAAQMDNWSQESPCPQARILHIFGRGGEIQPQLDAILFDNKISVSEFSPEALSCLPFVSWEVPQKEFQSRMDLRNLCIVTIDPSTASDLDDALSIEKLSNGNFRVGIHIADVSYFVLPNTTIDSEAQSRSTSIYMVQRKLSMLPASFSENIGSLNPGVDRLAVSMLLDINLDGDVLDRWIGRTVIKSCCKLSYDHAQDIIDGVIDVESSNTIGDPYPKVHGRFEWPDVIASVKNLYQISRVLKNKRFNDGALRLESPELVFLFDEDGIPYDIMLSDRKESNFLVEEFMLLANRTAAEVICRAYPGGALLRRHPEPNLRKLREFEAFCSKHGLELDTSSSGRFHWSLEKIRENLKDDPTLCDILISYATRPMQLAQYFCSGDLKDKQNDWGHYALAISAYTHVTSPLRRYPDIVVHRMLLAVIEAEEIYLEHEKMLQVTKGEEVRERYFTGMNFGEEVAESVEGRKALLAAALKHGVPCAELLADVAAYCNERKLASRNVKDACDKLYMWVLLKKKEVLLSEARILGLGPRFMSIYVQKLAIERRVYYDEVPGLTVEWLDATSTLVLSMCTDKRAFRRGSPGKWRAFEEVVLLACPCNLKDSNDGINESDAVKMGDMDLSSRSDSSGTEIDPAVFPLTLRVLATVPVALHAVGGDDGPLDIGVRLYMSSYLR 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0459 1090 MobiDBLite consensus disorder prediction 229 301 - -
Prci2g0459 1090 Gene3D - 119 218 - -
Prci2g0459 1090 Hamap DIS3-like exonuclease 2 [DIS3L2]. 32 1065 IPR028591 GO:0000175|GO:0034427
Prci2g0459 1090 SUPERFAMILY Nucleic acid-binding proteins 332 463 IPR012340 -
Prci2g0459 1090 MobiDBLite consensus disorder prediction 259 286 - -
Prci2g0459 1090 Pfam Dis3-like cold-shock domain 2 (CSD2) 380 459 IPR041505 -
Prci2g0459 1090 PANTHER RIBONUCLEASE 107 1087 - -
Prci2g0459 1090 Pfam RNB domain 489 841 IPR001900 GO:0003723|GO:0004540
Prci2g0459 1090 Gene3D - 364 447 - -
Prci2g0459 1090 SMART RNB_2 489 843 IPR001900 GO:0003723|GO:0004540
Prci2g0459 1090 SUPERFAMILY Nucleic acid-binding proteins 123 341 IPR012340 -
Prci2g0459 1090 SUPERFAMILY Nucleic acid-binding proteins 451 933 IPR012340 -
Prci2g0459 1090 ProSitePatterns Ribonuclease II family signature. 810 834 IPR022966 -
Prci2g0459 1090 FunFam DIS3-like exonuclease 2 115 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0459 Prci-Chr2 3337566 3344318 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0459 K18758 - gmx:100817387 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0459 2 3337566 3344318 Prci2g0459 2 3337566 3344318 ECH