LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g0375	ATGAACGGCATTGTCCTGAGGAAGGCATGGGGCTTAATTGCTTGGTGCCAATGCCCAAGGGGTACAAGAGTCCACTACCGTGGCCCCAGAGCAGAGATGAGGTACTTTTCGAGTTGGAACTGTGTGTGGTTCAGTAATGTACCTCACACACGTCTTGTTGAAGATAAAGGGGGCCAAAATTGGATAACTATAAAAAAGGATAAATTTGTCTTTCCTGGTGGTGGAACACAATTTATTCATGGTGCGGATAAATACCTGGATCAGATTTCAGCGATGGTTCCTGACATTGCATTCGGTCACAGCACCCGAGTTGCTTTAGACATTGGTTGTGGAGTGGCAAGTTTTGGTGCTTATTTGATGCAACGTAATGTCACCACTCTTTCAATTGCACCGAAAGATGTTCACGAAAACCAGATTCAGTTTGCTCTAGAGCGTGGTGTTCCTGCCATGGTAGCAATTTTTTCTATGCACCGTTTGCCATTTCCTAGCCAGGCTTTTGACCTGATTCATTGTTCAAGATGCAGAATCAATTGGACACGTGATGATGGAATTTTGCTTCTGGAGGCCGACAGGCTGCTGAGGGCAGGTGGATACTTTGTCTGGGCTGCACAACCTGTTTACAAGCATGAAGAGATCCTCCAAGGTCAATGGAAAGAAATGGAGAACCTAACTGCGCATATTTGCTGGGAGCTTGTGAGAAAGGAGGGATATATTGCTATATGGCGGAAACCAATGGACAATAGCTGCTACCTTAGTCGTGACATTGGTGTGCAGTCTCCACTTTGTGACTCCAATGATGATCCAGATGAAGTTTGGTATACTGACCTTAAGTCATGCATCTCTAGATTACCTAGTAGTGCTTGTGGAGCTAATGTTTCTAAGTGGCCTGCACGCCTTCATCAACCACCAGACAGGCTTCAGAGCATTAAAATGGATGCCCATATCTCTAGGAAGGAACTTTTCAAGGCTGAATCAAAATATTGGAAGGAAATAATAGATAGCTATATTGGAGCTTACCATTGGAAGGAATACAACCTAAGAAATGTTATGGACATGAGGGCAGGTTTTGGGGGGTTTGCAGCAGCTCTGCATGATCTTCAGATTGATTGTTGGGTTATGAATATTGTTCCTGTTAATGAATTCAATACCTTGCCTGTTGTATATGACCGTGGACTGATAGGAGTGATTCATGATTGGTGCGAACCATTTGACACATATCCAAGAACCTATGATCTGCTGCATGCAGCGGGTCTTTTCTCTGCTGAGAAAAAGAGGAAAAGGTGCAATATCTCAACCATCATGTTGGAGATGGATCGAATGTTAAGACCTGGTGGGCGCGTATATATACGGGACTCCATATACGTTATTAGCGAACTTGAAGAAATCGCAAATGCCATGGGCTGGGTGAATTTCCGGCATGACGTGGGCGAAGGTCCTTATGCTAGCTGGAAGATATTAAGATCTGAGAAGCGCTTCTGA	1479	0.4435	MNGIVLRKAWGLIAWCQCPRGTRVHYRGPRAEMRYFSSWNCVWFSNVPHTRLVEDKGGQNWITIKKDKFVFPGGGTQFIHGADKYLDQISAMVPDIAFGHSTRVALDIGCGVASFGAYLMQRNVTTLSIAPKDVHENQIQFALERGVPAMVAIFSMHRLPFPSQAFDLIHCSRCRINWTRDDGILLLEADRLLRAGGYFVWAAQPVYKHEEILQGQWKEMENLTAHICWELVRKEGYIAIWRKPMDNSCYLSRDIGVQSPLCDSNDDPDEVWYTDLKSCISRLPSSACGANVSKWPARLHQPPDRLQSIKMDAHISRKELFKAESKYWKEIIDSYIGAYHWKEYNLRNVMDMRAGFGGFAAALHDLQIDCWVMNIVPVNEFNTLPVVYDRGLIGVIHDWCEPFDTYPRTYDLLHAAGLFSAEKKRKRCNISTIMLEMDRMLRPGGRVYIRDSIYVISELEEIANAMGWVNFRHDVGEGPYASWKILRSEKRF	492

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g0375	492	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	31	470	IPR004159	GO:0008168
	Prci2g0375	492	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	31	490	IPR004159	GO:0008168
	Prci2g0375	492	FunFam	probable methyltransferase PMT3	81	244	-	-
	Prci2g0375	492	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	67	220	IPR029063	-
	Prci2g0375	492	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	327	475	IPR029063	-
	Prci2g0375	492	Gene3D	Vaccinia Virus protein VP39	84	242	IPR029063	-
	Prci2g0375	492	CDD	AdoMet_MTases	106	200	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g0375	Prci-Chr2	2620975	2625705	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g0375	-		-	qsa:O6P43_015118	818.15

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Prci2g0375	2	2620975	2625705	Prci2g0375	2	2620975	2625705	ECH