Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0372 ATGGGAAGAAAGAGGGAAATGGAAGTGACGTGGAAGAACAGCAAGAAACGTTCTTTGTCGGCGGTGTCCAACTTTGGTAACCTTCCTTTTGAGCATCCAGAGGAGGATGAGACTCCTCACCAAGACCGTGCTCGTTTGCAGGGCGATAAAGATGCCGAAATCGGTTCTCGTAACTCTGACCAATCCAAAGACCAAGATAGTCCCCAGTACTCCAACTTATCGGAAGCAAGACGTCTGGCCAAAGAATTTCAAGCTCAGGGAGACAGGCTTGCTGAGGATGGGAAGTACGCGGAAGCATTAGGTAAATGGGAGTCTGCTCTGTCACTGACACCTGAAGTTGCGGTATTACACGAACAGAAGGCCCAAGTTCTACTGGAAATTGGAGATGCTTGGAATGCTTTGAAGGCTGCGATGCGAGCTACGGAATTGCAGCCGTCGTGGGCTGAGGCATGGGTCACGCTTGGCAGAGCACAGCTAAATTTTGGCGAGCCTGATTGTGCTATTGTGAGCTTTGACAGAGCCCTATCTATCAAGCCCGATTGCGCGGATGCGCAAGAAGACCGAAAAACTGCATTACGTCTTGTAAAGAAGAGAAAGCAACTCCACTCAGCAGGCTTGAGTAATTCTAAAAATCGATATGCGGTTGGTGATAAAGATGAAAGCGCCTGA 669 0.4903 MGRKREMEVTWKNSKKRSLSAVSNFGNLPFEHPEEDETPHQDRARLQGDKDAEIGSRNSDQSKDQDSPQYSNLSEARRLAKEFQAQGDRLAEDGKYAEALGKWESALSLTPEVAVLHEQKAQVLLEIGDAWNALKAAMRATELQPSWAEAWVTLGRAQLNFGEPDCAIVSFDRALSIKPDCADAQEDRKTALRLVKKRKQLHSAGLSNSKNRYAVGDKDESA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0372 222 Coils Coil 73 93 - -
Prci2g0372 222 SMART tpr_5 80 113 IPR019734 GO:0005515
Prci2g0372 222 SMART tpr_5 148 181 IPR019734 GO:0005515
Prci2g0372 222 SMART tpr_5 114 147 IPR019734 GO:0005515
Prci2g0372 222 MobiDBLite consensus disorder prediction 202 222 - -
Prci2g0372 222 Gene3D Tetratricopeptide repeat domain 70 217 IPR011990 GO:0005515
Prci2g0372 222 ProSiteProfiles TPR repeat profile. 148 181 IPR019734 GO:0005515
Prci2g0372 222 PANTHER OSMOSIS RESPONSIVE FACTOR 7 221 - -
Prci2g0372 222 MobiDBLite consensus disorder prediction 22 75 - -
Prci2g0372 222 Pfam Tetratricopeptide repeat 148 181 IPR019734 GO:0005515
Prci2g0372 222 MobiDBLite consensus disorder prediction 30 60 - -
Prci2g0372 222 SUPERFAMILY TPR-like 79 199 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0372 Prci-Chr2 2610425 2613709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0372 92 184 Glycosyltransferase AT3G04240 29.032 3.65e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0372 - - pcin:129301673 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0372 2 2610425 2613709 Prci2g0372 2 2610425 2613709 ECH