Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0352 ATGGTTAAGGATACTGAGTATTATGATGTCCTGGGGGTTACTCCCTCTGCTTCCGAGGTTCAAATTCGAAAGGCTTATTACCATAAGGCAATGCAAGTTCATCCGGATAAGAACCCAAACGATCCTCAGGCTGCTCAAAAATTTCAGGTTTTGGGTGAGGCTTATCAAATTTTAAGCGATCCAGTGCAGAGGAACGCATACAATCAAAATGGAAAACATTGTGTGTCTAGGGAAACTATGCTAGATCCAATGGCTGTCTTTGCCCTGCTTTTTGGAAGTGAATTATTTGAGGACTACGTAGGGCATTTAACTGCGGCATCAATGACTACTTCTGAAATGGCTGATGAAAGTGAATTTCCGGATAAAATACATGAAAAATTGAAGGCTGTCCAAGGAGAAAGGGAAGAAAAACTAGCAAGTTTCTTGAAAGATTTTCTTGGTCAATATGTCCGTGGTGATGAAAAGGGATTCTTCCAGCGTGCAGAATCTGAAGCCAAACGACTTTCTAATGCAGATTTTGGACTTGATATGCTACACACCATCGGCTATATTTATTCAAGACAGGCAGCACTAGAATTGGGGAAAAAGGCCATTTATCTTGGAGTGCCTTTTTTGGCTGAATGGGTTCGACATAAAGGACATTTCTGGAAATCACAAGTAACTGCTGCCAAAGGTGCATTTCAGCTGCTGCAGCTTCAAGAAGACATCCACAAGCAATTTAAAATGGATGGCAGTGGCCCTGCAAATGATGTTGAATCTCATATTCGCCTTAATAAGGATACAATAATGAATTCTTTATGGAAGTTGAATGTAGTAGACATAGAAGTAACCCTGGTAAAGGTCTGTCAAATGGTCCTGAGGGAAAATAACGTTAAGAAAGAAGAACTGAAAGCCCGTGCTAACGCTCTCAAGATTCTTGGAAAGTTATTTCAGGAAAACAATTCAAAAGGAGGAGGAGCTTCGAAGAAGAAAATAGCGGCAGATTCTGAGGATGAAGGAAGCAGTTCAGATTCTTCCGAGGATGATGAATCACCGAGAGCAGTTTCCTATCGAACGCCTTTTTTCACTCAGGGTATAGGTAGGCTGTTCAAATGCCTGTGTAACCCAGCATTTGATGTGGACGACGAAGAGATCGTTTACAGAAGCAAATGA 1152 0.4132 MVKDTEYYDVLGVTPSASEVQIRKAYYHKAMQVHPDKNPNDPQAAQKFQVLGEAYQILSDPVQRNAYNQNGKHCVSRETMLDPMAVFALLFGSELFEDYVGHLTAASMTTSEMADESEFPDKIHEKLKAVQGEREEKLASFLKDFLGQYVRGDEKGFFQRAESEAKRLSNADFGLDMLHTIGYIYSRQAALELGKKAIYLGVPFLAEWVRHKGHFWKSQVTAAKGAFQLLQLQEDIHKQFKMDGSGPANDVESHIRLNKDTIMNSLWKLNVVDIEVTLVKVCQMVLRENNVKKEELKARANALKILGKLFQENNSKGGGASKKKIAADSEDEGSSSDSSEDDESPRAVSYRTPFFTQGIGRLFKCLCNPAFDVDDEEIVYRSK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0352 383 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Prci2g0352 383 Coils Coil 286 306 - -
Prci2g0352 383 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 334 - -
Prci2g0352 383 CDD DnaJ 6 60 IPR001623 -
Prci2g0352 383 SMART dnaj_3 5 63 IPR001623 -
Prci2g0352 383 Pfam X-domain of DnaJ-containing 131 319 IPR026894 -
Prci2g0352 383 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Prci2g0352 383 Pfam DnaJ domain 6 68 IPR001623 -
Prci2g0352 383 PRINTS DnaJ domain signature 43 63 IPR001623 -
Prci2g0352 383 PRINTS DnaJ domain signature 26 41 IPR001623 -
Prci2g0352 383 PRINTS DnaJ domain signature 8 26 IPR001623 -
Prci2g0352 383 Gene3D DnaJ domain 1 84 IPR036869 -
Prci2g0352 383 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Prci2g0352 383 MobiDBLite consensus disorder prediction 316 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0352 Prci-Chr2 2519748 2523543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0352 7 69 Miscellaneous Gene Families AT1G16680 40.909 4.46e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0352 - - gmx:100793811 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0352 2 2519748 2523543 Prci2g0352 2 2519748 2523543 ECH