Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0341 ATGCAGAGTTGCCGCTACCTTGCCACCCAAGCATGGGCCCCTACTGGCCGACATCCGACAACCGGCCGCCCCCGATTACCCACCCGCACTGTCAGGCTGCGATCACCGCCACCGATCTCCGCCGTGGCTGCTCCAGTCAAAAATAGAAAGGCTCACTCAATGCCGCCGGAGAAGGCCGAGGTTTTCAAGTCCCTGGAACGCTGGGCTTCGGAGGGGCTGCTGCCGCTGCTGAAGCCGGTGGAGCAATGCTGGCAACCGCAGAACTTCGTGCCCGACTCGTCGCTGCCGTCCGATGAATTCATGGATCAAGTGAAGGCACTGCGCGAACGGACGGCCGAGCTCCCGGATGAGTACTTCGTGGTACTGGTGGGTGATATGATCACGGAGGACGCATTGCCTACGTATCAGAGCATGATAAACAACCTGGATGCGGTCGGGGACGAGACCGGAGCAAGCCCAGATCCGTGGGCCGTTTGGACCCGCTCTTGGACCGCCGAGGAGAATAGGCACGGGGATTTGCTTAGAACCTATCTCTACTTATCCGGTCGGGTTGATATGCTTATGGTCGAGAAGACCGTGCAGTATTTGATTGGAGCTGGAATGGATCCTGGGACAGAGAACAACCCATATTTGGGATTCGTCTACACGTCGTTTCAAGAGCGAGCCACCTTCGTGTCACACGGCAACACGGCTCGCTTAGCGAAGGAGGGGGGAGATCCGGTGCTAGCGCGCATATGTGGCACCATCGCAGCAGACGAGAAACGCCACGAGAATGCGTACGCGAGAATTGTCGAGAAGCTGCTGGAAGTGGACCCCACGGGAGCAATGCTGGCCATCGCAGATATGATGCACAAGAAAATAACAATGCCCGCGCATTTGATGTACGACGGGAAGGATCCCCGTCTGTTCGAACACTTCTCTGCGGTGGCGCAGCGGACGGGAGTGTATACGGCGAACGATTACGCGGACATATTGGAGTTTTTGGTCGGACGATGGAAGTTGGAGAAGCTGGAGGGGCTGACGGGCGAAGGGAGGCGTGCGCGGGATTTCGTGTGTGGACTAGCACCGAGGATTAGGAAGTTGCAAGAGCGAGCAGATGAGAGGGCACGCAAGATGGGGCCTCATAGTGTCAAATTCAGCTGGATCTTCAACAAGGAGGTGGCCTTGACCATGTGA 1176 0.5748 MQSCRYLATQAWAPTGRHPTTGRPRLPTRTVRLRSPPPISAVAAPVKNRKAHSMPPEKAEVFKSLERWASEGLLPLLKPVEQCWQPQNFVPDSSLPSDEFMDQVKALRERTAELPDEYFVVLVGDMITEDALPTYQSMINNLDAVGDETGASPDPWAVWTRSWTAEENRHGDLLRTYLYLSGRVDMLMVEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYARIVEKLLEVDPTGAMLAIADMMHKKITMPAHLMYDGKDPRLFEHFSAVAQRTGVYTANDYADILEFLVGRWKLEKLEGLTGEGRRARDFVCGLAPRIRKLQERADERARKMGPHSVKFSWIFNKEVALTM 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0341 391 SUPERFAMILY Ferritin-like 46 387 IPR009078 -
Prci2g0341 391 Pfam Fatty acid desaturase 57 383 IPR005067 GO:0006631|GO:0045300
Prci2g0341 391 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 41 389 - -
Prci2g0341 391 Gene3D Ribonucleotide Reductase, subunit A 42 389 IPR012348 GO:0016491
Prci2g0341 391 PIRSF Dlt9_acylACP_des 18 389 IPR005067 GO:0006631|GO:0045300
Prci2g0341 391 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 45 387 IPR005067 GO:0006631|GO:0045300
Prci2g0341 391 CDD Acyl_ACP_Desat 57 365 IPR005067 GO:0006631|GO:0045300
Prci2g0341 391 MobiDBLite consensus disorder prediction 14 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0341 Prci-Chr2 2406595 2408675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0341 9 389 Acyl Lipid Metabolism Gene Families AT1G43800 74.935 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0341 K03921 - rcu:8277360 626.706