Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4619 ATGCGCCTGCCCACTGATAACTTCCAAAATGATACGTACGAGAAGGCAGGAGAAATGAGAAAAACAAGGAGGAAATTGAAAGGAGCGGTGATGTCTCCCCACCTTTGTCGCTGGATCCCTCTGAGACTTGTTCCCAATGTTAACCATCGCTCACTCATTTTGTTTTGCCTCCTCAAACATGCGACATGGCTTCCTCCTCTTTTCTTCGCCCTCTTGTCCCTTCTTCCCCATAGCTTCTTCTTCCCTCACTCGCAGGGTCCTTCAATCTTTTTTGGGGGACCCTTCGCCCCTCCCCTTTCTTTAACTCCCTTTCTTTTCTCCTCTCTTCTTTTCTGTTTCTCCCTACCTTTCTTTTTTCTTCAATTTTCTCTCGCCTTAGATGTTTGCACCGCTTTCACTATGAATTGTTTCTCGTGTTTCACCTCCCAGAAAAGTAAGAAAAACCTTGGCGGGGGAGACCTTGAATCCGCACCCCAGGATCATCATGTCGCTTCAAAACCGCTGGATAATGGAAACCAAGGTCAGAGCCCAAATATTCAAGCGCAAGCGTTCACTTTCCGCGAGCTGGCCACCGCCACCAAGAATTTCAGGCAGGAATGCCTGTTGGGTGAGGGTGGATTCGGAAGAGTGTACAAGGGCACCATTCCGGCGACCGGCAAGGTGGTAGCTGTGAAGCAATTGGACCGAAACGGGATGAATGGCAGCAAGGATTTTCTGACAGAGGTTGCAGTTTTGAGTCGCCTGAACCATGAAAACCTGGTGAATCTAGTTGGTTACTGTGCCGATGGGGATCAACGTCTCCTGGTGTATGAGTACATGCCGGGGGGCTCTGTATACGATCGTCTTTTTGAGCCAGAGGAAGGCGAGTCTCCACTGGATTGGTTCAACAGAATGAAAATAGCGTCGGGAGCAGCGAGAGGACTGGAGTATTTGCACGACAAGGCCAATCCCCCAGTTGTTTACAGGGACTTGAAATCCTCGAATATATTGCTGGACGATGATCTTAACCCCAAATTATCTGATTTTGGGCTCAACAAGCTTTCCAGGGGAGACAGGACAAATATCATATCCCCCGGAGTTATGGGTACTTATGGCTACTCTGCTCCCGAGTACGTAAGGACCGGACACCTCACCTTGAAATCAGATGTCTACGGTTTTGGAGTTGTGCTGCTAGAGCTCATCACCGGACGACGAGCCATTGATACTACCAAACCCAACGAGGAGCAAAATTTAGTTTCATGGGCACAGCCCTTATTCAGAAATCCAAAACAATTCCCGGAAATCGCAGATCCGCTGCTGAAGAAGCATTTCCCGGAAAAGGATCTAAATCAAGCGGTAGCAGTGGCGGCCATGTGCCTCCAGGAGGAGGAAGGGGCGAGGCCTTTGATGAGCGACGTGGTGATGGCTCTGAGTTTCTTGTCCATGGTTCCGCCGGAGGTAATTCCAGCATCGGTGTCGCCGGCCACCTTGCCCCCACAGGATGACGGCTCAGAGGAGGAGGAGGAGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGATTCTGACGGGACGGGACGGAAATCAAGCCGCAGAAGCAGCATGAGCTGGGAAGAGGGAAGTGTGTCATCAAGCAAGAAATCGCGAAATTTAAACAAGAAGAAAAGCAGCTCCAGAGATTTAAAGCAGAAGAGCAGCAAGAAGGGTGGGGGGAAAGTGTCGAGCAGAAAGAGCAGTAGAAAATCATCGAGAAGCAGGAAGATGAGCACGGAGTGGGAGGAAGGTGGAGGAGAGGGAATGCACGAGAGAGGGAGCAGCACGATGTCTCAGAGAGATATGTCGTTTGGGCTCATCAGCAGCGGGGAAAGCGTTCGCAGCGACGGCGGCGGCGACTACAGCGACAGCGACAGGGGCTCGACGGAAGGGGCCCACCAGCGGCTGCAGCACGCCCATACTGCCAAACAGCCTCCCAAGGATCCCCACAGGGAACGACTCACCGCCTCTAGCGCTAAAGTATGA 1998 0.521 MRLPTDNFQNDTYEKAGEMRKTRRKLKGAVMSPHLCRWIPLRLVPNVNHRSLILFCLLKHATWLPPLFFALLSLLPHSFFFPHSQGPSIFFGGPFAPPLSLTPFLFSSLLFCFSLPFFFLQFSLALDVCTAFTMNCFSCFTSQKSKKNLGGGDLESAPQDHHVASKPLDNGNQGQSPNIQAQAFTFRELATATKNFRQECLLGEGGFGRVYKGTIPATGKVVAVKQLDRNGMNGSKDFLTEVAVLSRLNHENLVNLVGYCADGDQRLLVYEYMPGGSVYDRLFEPEEGESPLDWFNRMKIASGAARGLEYLHDKANPPVVYRDLKSSNILLDDDLNPKLSDFGLNKLSRGDRTNIISPGVMGTYGYSAPEYVRTGHLTLKSDVYGFGVVLLELITGRRAIDTTKPNEEQNLVSWAQPLFRNPKQFPEIADPLLKKHFPEKDLNQAVAVAAMCLQEEEGARPLMSDVVMALSFLSMVPPEVIPASVSPATLPPQDDGSEEEEEEGEGEGEGEGEDSDGTGRKSSRRSSMSWEEGSVSSSKKSRNLNKKKSSSRDLKQKSSKKGGGKVSSRKSSRKSSRSRKMSTEWEEGGGEGMHERGSSTMSQRDMSFGLISSGESVRSDGGGDYSDSDRGSTEGAHQRLQHAHTAKQPPKDPHRERLTASSAKV 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4619 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Prci1g4619 665 MobiDBLite consensus disorder prediction 513 527 - -
Prci1g4619 665 CDD STKc_IRAK 202 467 - -
Prci1g4619 665 Gene3D Transferase(Phosphotransferase) domain 1 273 476 - -
Prci1g4619 665 MobiDBLite consensus disorder prediction 562 576 - -
Prci1g4619 665 SMART serkin_6 196 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4619 665 Pfam Protein kinase domain 198 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4619 665 SUPERFAMILY Protein kinase-like (PK-like) 176 475 IPR011009 -
Prci1g4619 665 Gene3D Phosphorylase Kinase; domain 1 168 272 - -
Prci1g4619 665 MobiDBLite consensus disorder prediction 494 512 - -
Prci1g4619 665 MobiDBLite consensus disorder prediction 622 665 - -
Prci1g4619 665 MobiDBLite consensus disorder prediction 150 174 - -
Prci1g4619 665 MobiDBLite consensus disorder prediction 483 665 - -
Prci1g4619 665 PANTHER OS07G0668900 PROTEIN 136 475 - -
Prci1g4619 665 MobiDBLite consensus disorder prediction 596 614 - -
Prci1g4619 665 ProSiteProfiles Protein kinase domain profile. 196 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4619 665 FunFam Serine/threonine-protein kinase PBS1 273 484 - -
Prci1g4619 665 FunFam probable serine/threonine-protein kinase RLCKVII 168 272 - -
Prci1g4619 665 ProSitePatterns Protein kinases ATP-binding region signature. 202 225 IPR017441 GO:0005524
Prci1g4619 665 MobiDBLite consensus disorder prediction 577 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4619 Prci-Chr1 59405639 59408410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4619 134 543 Glycoside Hydrolase AT3G07070 56.410 5.33e-154 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci1g4619 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4619 - - pcin:129308805 1154.43