Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4321 ATGTCGAGCTTCAGCATTTGGTTTGCTCTGGGGGCACTAGCTCTTGTATTCGTCTCATCGGTTTCGGCCGACGACGTCGTCGTGCTGACGGAGGCCAACTTCGATCAAGAAGTTGGCCAAGATCGCGCCGCTCTTGTCGAGTTCTACGCTCCGTGGTGTGGACATTGTAAAAGGCTCGCACCAGAGTATGAAAAACTGGGAGCAAGTTTTAAAAAAGCCAAATCCATTTTGATTGCGAAGGTAGACTGTGATGATCAAAAAAGCCTTTGCAGCAAATATGGTGTCTCTGGTTATCCCACAATTCAATGGTTTCCTAATGGGTCATTGGAACCAAAGAAGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGATTTTGTAAACAAAGAAGGAGGTACCAATGTGAAAATAGCTTCTGTCCCATCCAGTGTGGTGGTTCTCACTCCAGATAACTTTGATCAGGTTGTTTTGGATGAAACAAAAGACGTTCTGGTTGAGTTCTATGCTCCATGGTGTGGTCATTGTAAAGGCCTCGCCCCTACTTATGAAAAGGTCGCTACAGCATTCAAACTAGAGGAAAATGTCGTAATAGCAAATATTGACGCTGATCAACACAAAGATATTGCTGAGAAGTATGGTGTAAGTGGCTATCCAACTCTAAAATTTTTCCCAAGGAGCAATAAAGCTGGTGAAGATTATGATGGTGGCCGAGACTTGGATGACTTTGTAACTTTTATCAATGAGAAAAGTGGCACCAGCCGTGATGGGAAAGGGCAGCTTACTTCTAAAGCTGGTATAGTACCAACTCTGGATGGCTTGGTGAAGGATTTTGTGAGTGCTTCTAGTGATGAAAAGAAAGAGGTTTATTCTCGGCTTGAGGAAGAAGCCAAGAAACTTGAGGGTTCTGCTGCAAGATATGGCAATATCTACTTAAAAGCTGCTAAAAACTGCATTGAAAAAGGAGTTGACTATGCATCCAAGGAGATTCAAAGACTTGAGCGCATACTTGACAAGTCAGTCAGCCCTGCCAAGGCAGATGAGCTCACTCTCAAGAAGAACGTCTTGTCTACGTTTGTTGCTTGA 1083 0.4404 MSSFSIWFALGALALVFVSSVSADDVVVLTEANFDQEVGQDRAALVEFYAPWCGHCKRLAPEYEKLGASFKKAKSILIAKVDCDDQKSLCSKYGVSGYPTIQWFPNGSLEPKKYEGARTAEALADFVNKEGGTNVKIASVPSSVVVLTPDNFDQVVLDETKDVLVEFYAPWCGHCKGLAPTYEKVATAFKLEENVVIANIDADQHKDIAEKYGVSGYPTLKFFPRSNKAGEDYDGGRDLDDFVTFINEKSGTSRDGKGQLTSKAGIVPTLDGLVKDFVSASSDEKKEVYSRLEEEAKKLEGSAARYGNIYLKAAKNCIEKGVDYASKEIQRLERILDKSVSPAKADELTLKKNVLSTFVA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4321 360 PRINTS Thioredoxin family signature 171 180 - -
Prci1g4321 360 PRINTS Thioredoxin family signature 213 224 - -
Prci1g4321 360 PRINTS Thioredoxin family signature 163 171 - -
Prci1g4321 360 CDD PDI_a_ERp38 25 127 - -
Prci1g4321 360 FunFam Protein disulfide-isomerase A6 homolog 138 256 - -
Prci1g4321 360 SUPERFAMILY ERP29 C domain-like 264 359 IPR036356 -
Prci1g4321 360 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Prci1g4321 360 ProSitePatterns Thioredoxin family active site. 164 182 IPR017937 -
Prci1g4321 360 CDD ERp29c 267 358 IPR011679 GO:0005783
Prci1g4321 360 SUPERFAMILY Thioredoxin-like 24 132 IPR036249 -
Prci1g4321 360 Coils Coil 282 309 - -
Prci1g4321 360 ProSiteProfiles Thioredoxin domain profile. 136 251 IPR013766 -
Prci1g4321 360 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 118 346 - -
Prci1g4321 360 Pfam Thioredoxin 26 128 IPR013766 -
Prci1g4321 360 Pfam Thioredoxin 144 247 IPR013766 -
Prci1g4321 360 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 265 358 IPR011679 GO:0005783
Prci1g4321 360 Gene3D Glutaredoxin 19 131 - -
Prci1g4321 360 Gene3D Glutaredoxin 132 263 - -
Prci1g4321 360 FunFam Protein disulfide-isomerase A6 homolog 19 137 - -
Prci1g4321 360 NCBIfam protein disulfide-isomerase domain 29 130 IPR005788 GO:0003756
Prci1g4321 360 NCBIfam protein disulfide-isomerase domain 147 249 IPR005788 GO:0003756
Prci1g4321 360 SUPERFAMILY Thioredoxin-like 141 252 IPR036249 -
Prci1g4321 360 Gene3D - 264 360 IPR036356 -
Prci1g4321 360 CDD PDI_a_ERp38 143 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4321 Prci-Chr1 57523033 57528420 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4321 K09584 - nnu:104605120 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4321 1 57523033 57528420 Prci1g4321 1 57523033 57528420 ECH