Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4305 ATGGGCTCTCTGGGAAGTGAAACTGCAAAGAAAGCAATGTGGCTATATCCAAAAGTCTTGGGTTTTAAACCTTCTGAAAGATGGGGGCACTCTGCTTGCTTTTCCGTGGGCCTTGTGTATGTCTTTGGGGGGTGTTGTGGGGGGCTTCATTTTAGCGATGTTCTGACTCTGGACCTTAACAATATGACATGGAGAAAACTGGCAACAACCGGGGAAGGGCCTGGTCCTCGAGATAGCCATAGCGCTGTTCTTGAAGGCCATAAAATGATAGTGTTTGGTGGTACGAATGGCTTCAAGAAGGTTAATGATATTCATATCCTAGATCTGATCACCCTAGAGTGGGTTCGTCCTGAATGCAAAGGAAGCCCTCCTTCTCCACGTGAAAGCCACACTGCCACTCTGTTTGGTGAAGAAAGATTAGTGATCTTTGGTGGTAGTGGAGAAGGTGATTCAAACTACTTGAACGATTTGCATATTCTGGATCTCCGAACCATGAGATGGACTTCTCCAGAGGTGAAAGGTGATTTGCCTGTCCCTAGGGACAGTCACACTACTCTGGCTATTGGGAACAAGCTTTTTGTTTATGGAGGAGACTCTGGTGATCAGTATCATGGTAACGTCAATATGCTGGATCTGGATACAATGACTTGGTCAAAGTTGACTGTTCAAGGGCCTTCCCCTGGCGTAAGAGCAGGACATGCTGCTGTTAACATTGGAACCAAGGTGTATATTATCGGAGGGGTCGGAGATAAACGTTACTATAATGATGTTTGGGTGTTTGATATCTACACTTGTTCTTGGACTCAGCTTGAAATACGAGGTCAGCAACCCCAAGGGCGGTTTTCACACACAGCAGTTGCTGCTGACATGGACATTGTCATATATGGAGGGTGCGGGGAAGATGAACGTCCTCTGGATGAATTGTTAGTGTTGCAGCTGGGAGCAGAGCACCCAAACGGACGTTACAACGTATCCATGGGCAAAGTCTTTGGAAGCTGTTGGAAGAAGACCTGCTCAAGCGGAGCGGACAGCAACCTGGCAGTGCTCATGGGGAATAATGCGGACACTGTAGGAACTTACGAATTCACAGCAGGAAAAAAGCAGCCTTTCCATTTGGAATCCGATGCTTCCCAACAGAAGAAGAGGAGAATTGCTGCTTCAAAGGTGTGGGATGTTGATTTAGAACAGGAAGAGCATTCTCTTTCCTTGTCCCAGCATTCTTCTCCGACCCAATCCGATCGAGAACACAACACCGCACAAAAACCTAATGCTTCCACCACGGACTCTCAGCGATTTCTCATGTTCAAACCGTTAAACCAAATACCAACCAGTTCTCAACATGACAACCCTTCCATCAACCCAAAAGTACTAAAGAATTCCAACCAGAGGAATCCCCAGGGCTTTCATTATCTAAAACAATATCACCATGTTTATGATGCAGAGCACTCGCCCATGGTTCGAGGGCCCATCCAACACCTGATCGGTGCTGAAGTCCGAGGAAGAGTTGATGGGGCCTTTGACTCGGGTTTGCTGATGACCGCGACGGTGAACGGAAAAATTTTCAGAGGAGTGCTGTTCGCACCCGGGACGGGAACAGTGTCGAGAAGGCCCAGTATGGAACCGAGCAGTTGGATGCATGGTGCGTGTGCGACGAACTCGAATCATAAGGGCGAGAATACGAGAGGATGCCAGCAGGTAAGTGGTTGTTCGAGGACAGAGTCGTGTCAGGTGACTCAACCATTCCCAATGATGAGAGCGAAAGGCGCTGCGTCGTTTTCCAAAGAAGAGAAGATGAGGAGCGATCTTAATGGGTTGGCTCTGACACTAGGAGGAGCTGCTAGCGGCCACCACCGTGGTGGATCCTGA 1866 0.4834 MGSLGSETAKKAMWLYPKVLGFKPSERWGHSACFSVGLVYVFGGCCGGLHFSDVLTLDLNNMTWRKLATTGEGPGPRDSHSAVLEGHKMIVFGGTNGFKKVNDIHILDLITLEWVRPECKGSPPSPRESHTATLFGEERLVIFGGSGEGDSNYLNDLHILDLRTMRWTSPEVKGDLPVPRDSHTTLAIGNKLFVYGGDSGDQYHGNVNMLDLDTMTWSKLTVQGPSPGVRAGHAAVNIGTKVYIIGGVGDKRYYNDVWVFDIYTCSWTQLEIRGQQPQGRFSHTAVAADMDIVIYGGCGEDERPLDELLVLQLGAEHPNGRYNVSMGKVFGSCWKKTCSSGADSNLAVLMGNNADTVGTYEFTAGKKQPFHLESDASQQKKRRIAASKVWDVDLEQEEHSLSLSQHSSPTQSDREHNTAQKPNASTTDSQRFLMFKPLNQIPTSSQHDNPSINPKVLKNSNQRNPQGFHYLKQYHHVYDAEHSPMVRGPIQHLIGAEVRGRVDGAFDSGLLMTATVNGKIFRGVLFAPGTGTVSRRPSMEPSSWMHGACATNSNHKGENTRGCQQVSGCSRTESCQVTQPFPMMRAKGAASFSKEEKMRSDLNGLALTLGGAASGHHRGGS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4305 621 SMART kelc_smart 191 240 IPR006652 GO:0005515
Prci1g4305 621 SMART kelc_smart 38 86 IPR006652 GO:0005515
Prci1g4305 621 SMART kelc_smart 139 190 IPR006652 GO:0005515
Prci1g4305 621 SMART kelc_smart 241 290 IPR006652 GO:0005515
Prci1g4305 621 Pfam Galactose oxidase, central domain 39 83 - -
Prci1g4305 621 Pfam Galactose oxidase, central domain 230 277 - -
Prci1g4305 621 MobiDBLite consensus disorder prediction 401 463 - -
Prci1g4305 621 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 13 557 - -
Prci1g4305 621 Pfam Kelch motif 127 180 - -
Prci1g4305 621 MobiDBLite consensus disorder prediction 397 463 - -
Prci1g4305 621 Gene3D - 13 119 IPR015915 GO:0005515
Prci1g4305 621 SUPERFAMILY Kelch motif 19 221 IPR015915 GO:0005515
Prci1g4305 621 Gene3D - 120 371 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4305 Prci-Chr1 57436038 57439840 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4305 14 323 Acyl Lipid Metabolism Gene Families AT3G05420 30.650 1.07e-36 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4305 K20285 - gmx:100801275 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4305 1 57436038 57439840 Prci1g4305 1 57436038 57439840 ECH