Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4302 ATGGCCTCCAGAACGGTCAATTCCTCTCTATCCCGCTCCGCAACTACCTTCCTATTCTCCTTCAATCAGAAAGGACTGAGACCTACATCACTCCCTCTCCTCCGATCCTTCCAGTGCAGATCGAGACGCCTCGTTTTGTCGCGAAGATTGGTGCTGAAAGCTTGCGTCAATGTGGAAGAGAAAAATGTTGCGGAAAATTCATCTGCAAGTGAATGGGGGAAGGTTTCTGCTGTGTTGTTTGACATGGACGGTGTCCTCTGCAACAGTGAAGACCTTTCCAGAAGAGCGGCCGTTGATGTCTTCGCGGAGATGGGCGTCCAAGTCACTGTCGAGGATTTTGTGCCATTCATGGGAACCGGCGAAGCAAACTTTTTGGGAGGTGTTGCCTCTGTCAAGGGAGTTGAAGGATTTGATCCAGAAGCTGCAAAACAGAGATTCTTTGAAATTTATTTAGACAAGTATGCAAAACCAGAGTCTGGAATTGGATTCCCAGGTGCCCTCGAACTAATTTCCCAGTGCAAAAGCAAAGGCCTTAAAGTTGCTGTTGCATCTAGTGCTGACCGTATAAAGGTTGATGCAAATCTAGCTGCTGCTGCTTTACCATTGTCATTGTTTGATGCTATCGTGTCTGCAGATGCTTTTGAGAATTTGAAACCTGCTCCTGATATTTTTTTGGCTGCATCAAGAACATTGAATGTGCCGCCTGGTGAGTGTCTTGTTATAGAAGATGCATTGGCTGGAGTGCAGGCTGCCAAAGCTGCACAGATGAGATGCATAGCAGTCAGGACCACACTATCTGATGAGGCATTAGGATCTGCTGGCCCAGCACTTATCCGTGATGATATAGGAAATGTTTCACTTGATGATATTCTTAGTGGTGGCTCTGTTGGCCATAATAAGAGGATGCAGGGGCAACAATCTTTTAATAATTCCGCACAAACTTCATCTGCAATGCTTGCTGGAAATTCAGATGACAGACTTAGCAAGACTGAAAGTGGTGCCAATGGGGAGATTTTCCCTACTAAATGGTTGCAGGGTTCTCGACGAGATGTACTAAGATTTGGAAGCCTTGGTATTGCTGTCTCTTGCCTCATCTTCACTGTAAATAACTGGAAGGCAATGCAGTATGCTTCCCCCAAATCTATTTGGAATCTGTTGTTTGGTGTAAGCCAACCATCTTTGGAGCAAGAAGGCAAAACAAGATCTGATAGGATCCAGCAATTTATGAACCACATTGCTGATCTGGAAGGCAGGAGAAATGCGCAGATTGTTCCAGAATTTCCACCTAAACTTGATTGGCTGAATACATCCCCCCTTCAGTTTGGCAGGGATCTGAGAGGCAAAGTGGTTCTGCTGGATTTCTGGACTTATTGTTGTATCAATTGCATGCATGTGTTGCCAGATCTGGATTTTTTGGAAAAGAAATACAAAAATATGCCGTTCATTGTTGTGGGTGTCCATTCTGCAAAGTTTGATAATGAGAAAGATTCTGAAGCCATTCGCAGTGCAGTGCTCCGTTATGATATCACTCACCCAGTTGTCAATGATGGAGATATGTATCTTTGGCGGAAGCTGGGCATAAGTTCATGGCCAACATTTGCTGTCATTGGGCCTAATTGTAATCTGCTCGCACAAATTTCAGGAGAAGGTCACAAGAAGGATCTTGATGATTTTGTGGAGGCAGCTCTTCTGTTTTATGGAAAACAGAACATGTTAGACAATACACCACTTACATTGAATTTGGAGAAAGATAACGATCCTCGCCTGGCAACATCTCCATTGAAGTTTCCAGGAAAGCTAGCAATTGATGTCCTCAATGACAGACTTTTCATTTCAGACAGCAACCATAACCGCATAGTGGTGACAGACCTAGATGGGAATTTTATTGTGCAAATTGGGAGCAGTGGGGAGGAGGGTTTCCAGGATGGTTCATTTGATGATGCCACCTTTAACCGCCCTCAGGGTGTTGCTTATAATGCAAAGCAAAATATCCTTTATGTTGCTGACACTGAAAACCATGCTTTGAGAGAGATTGATTTTGTTAATGAGAAAGTACGAACTCTTGCTGGAAATGGGACCAAAGGTTCTGACTATACTGGTGGAGGGAAAGGAGCCATTCAGCTCCTCAATTCCCCTTGGGATGTATGCTTTCATCCAGTGGAAGAAAAAATTTATATTGCCATGGCTGGCCAACATCAGATATGGGAGCACAATTTATTAGATGGAATCACAAGAGCATTTAGTGGTGATGGTTATGAGAGGAATTTAAATGGATCAAGCTCCACAAGCACCTCATTTGCTCAACCTTCTGGCATATCATTGTCTCAAGATCAAATGGAAGTATACATTGCTGACAGTGAGAGTAGTTCAATTCGAGCTGTTGATCTAAAGACTGGAGGATCAAGGTTGCTTGTTGGTGGTGACCCAATCTTCCCAGATAATTTGTTCAAGTTTGGTGATCATGATGGAGTAGGCTCTGAAGTACTTCTTCAACATCCACTAGCAGTTTTGTGTGCTAAAGATGGCCAAATTTACATCACTGACAGCTACAATCATAAGATCAAAAAGTTAGATCCAGCTGGTAAAAGAGTTAGCACACTTGCAGGAACAGGGAAAGCTGGATTTAGGGATGGAACACCTGTAGCTGCTCAGCTCTCCGAACCGTCTGGAATTGTTGAAGGGAATAATGGGAGACTATTCATAGCTGATACAAACAACAGCTTAATCCGATATCTGGATTTAAACAACGAAAGTTTGGAACTCCATACCTTAGAGCTTAAAGGCTTTCAACCTCCTTCACCTAAATCCAGGGCTTTTAGACGTCTAAGGAGACGATCATCAGCAGACACAGTGACCATCGCCACCAATGGTGTTTCATCAAATGAAGGACGTTTGTCTATTCATGTATCATTACCAAATGAGTACCATTTCTCAAAGGAAGCACGTAGTAGATTTATTGTTGATATTGAACCTGAAGATGCCGTCAATATTGAACCCCAGGATGGCTTCCTTGATGAGGGATCTGCAGCTCTTCATTTCAAGAGATCATCTACTTCAGCTTCTGTGGGAAGAATTAATTGCAAGATTTACTATTGCAAGGAAGACGAGGTTTGTTTGTATCAGTCCTTAGAGTTTGAGGTGCCTTTCCGAGTGGCAGAACCTAACTCCGCCCCAGCAGATGTCAGTCTTTCGCATTTAGTGAAACCCAAAGCTTCGGCTAGTAGCTTACTACAGCCCGTTGCCCCTTGA 3249 0.4358 MASRTVNSSLSRSATTFLFSFNQKGLRPTSLPLLRSFQCRSRRLVLSRRLVLKACVNVEEKNVAENSSASEWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFAEMGVQVTVEDFVPFMGTGEANFLGGVASVKGVEGFDPEAAKQRFFEIYLDKYAKPESGIGFPGALELISQCKSKGLKVAVASSADRIKVDANLAAAALPLSLFDAIVSADAFENLKPAPDIFLAASRTLNVPPGECLVIEDALAGVQAAKAAQMRCIAVRTTLSDEALGSAGPALIRDDIGNVSLDDILSGGSVGHNKRMQGQQSFNNSAQTSSAMLAGNSDDRLSKTESGANGEIFPTKWLQGSRRDVLRFGSLGIAVSCLIFTVNNWKAMQYASPKSIWNLLFGVSQPSLEQEGKTRSDRIQQFMNHIADLEGRRNAQIVPEFPPKLDWLNTSPLQFGRDLRGKVVLLDFWTYCCINCMHVLPDLDFLEKKYKNMPFIVVGVHSAKFDNEKDSEAIRSAVLRYDITHPVVNDGDMYLWRKLGISSWPTFAVIGPNCNLLAQISGEGHKKDLDDFVEAALLFYGKQNMLDNTPLTLNLEKDNDPRLATSPLKFPGKLAIDVLNDRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGFQDGSFDDATFNRPQGVAYNAKQNILYVADTENHALREIDFVNEKVRTLAGNGTKGSDYTGGGKGAIQLLNSPWDVCFHPVEEKIYIAMAGQHQIWEHNLLDGITRAFSGDGYERNLNGSSSTSTSFAQPSGISLSQDQMEVYIADSESSSIRAVDLKTGGSRLLVGGDPIFPDNLFKFGDHDGVGSEVLLQHPLAVLCAKDGQIYITDSYNHKIKKLDPAGKRVSTLAGTGKAGFRDGTPVAAQLSEPSGIVEGNNGRLFIADTNNSLIRYLDLNNESLELHTLELKGFQPPSPKSRAFRRLRRRSSADTVTIATNGVSSNEGRLSIHVSLPNEYHFSKEARSRFIVDIEPEDAVNIEPQDGFLDEGSAALHFKRSSTSASVGRINCKIYYCKEDEVCLYQSLEFEVPFRVAEPNSAPADVSLSHLVKPKASASSLLQPVAP 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4302 1082 Gene3D - 77 268 IPR023214 -
Prci1g4302 1082 Pfam NHL repeat 650 675 IPR001258 GO:0005515
Prci1g4302 1082 Pfam Haloacid dehalogenase-like hydrolase 78 261 IPR041492 -
Prci1g4302 1082 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 74 282 - -
Prci1g4302 1082 CDD HAD_BPGM-like 77 263 - -
Prci1g4302 1082 ProSiteProfiles NHL repeat profile. 830 860 IPR001258 GO:0005515
Prci1g4302 1082 FunFam NHL repeat-containing protein 2 579 735 - -
Prci1g4302 1082 FunFam Chloroplast protein HCF243 810 914 - -
Prci1g4302 1082 SUPERFAMILY NHL repeat 589 917 - -
Prci1g4302 1082 Gene3D Glutaredoxin 392 565 - -
Prci1g4302 1082 ProSiteProfiles Thioredoxin domain profile. 385 564 IPR013766 -
Prci1g4302 1082 Pfam Thioredoxin-like 447 541 IPR012336 -
Prci1g4302 1082 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 75 86 IPR006439 -
Prci1g4302 1082 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 205 221 IPR006439 -
Prci1g4302 1082 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 223 243 IPR006439 -
Prci1g4302 1082 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 173 186 IPR006439 -
Prci1g4302 1082 Gene3D - 814 913 IPR011042 -
Prci1g4302 1082 Gene3D - 566 736 IPR011042 -
Prci1g4302 1082 SUPERFAMILY HAD-like 75 284 IPR036412 -
Prci1g4302 1082 Gene3D Putative phosphatase; domain 2 88 159 IPR023198 -
Prci1g4302 1082 FunFam NHL repeat-containing protein 2 402 566 - -
Prci1g4302 1082 SUPERFAMILY Thioredoxin-like 422 560 IPR036249 -
Prci1g4302 1082 CDD NHL-2_like 632 973 IPR045302 -
Prci1g4302 1082 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 100 1077 - -
Prci1g4302 1082 SFLD Haloacid Dehalogenase 74 282 - -
Prci1g4302 1082 SMART LY_2 587 629 IPR000033 -
Prci1g4302 1082 SMART LY_2 759 801 IPR000033 -
Prci1g4302 1082 SMART LY_2 823 864 IPR000033 -
Prci1g4302 1082 NCBIfam HAD-IA family hydrolase 198 261 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4302 Prci-Chr1 57376925 57416878 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4302 - - aip:107645958 1691.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4302 1 57376925 57416878 Prci1g4302 1 57376925 57416878 ECH