Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4288 ATGGCTTTTCACTCTCTTCCACTCTCCTTGCAGCTACTCTTCATTTGTTCCTTTCCGCTTCCTGCCCTGGCTCAGTGCACTAAGGATGCCGTCATATTCGTGTTCGGCGACTCCAACTCGGACACTGGAGGCCTCGCTTCCGGACTCGGGTTCCCCATCAATCTTCCTAATGGCCGCACTTTCTTTCACAGATCCACCGGTCGCTTGTCCGATGGACGCCTCATCATCGATTTTCTCTGTCAAAGTTTGAATGCAAGTCTTTTGACCCCATACCTGGACGCCTTGTCTGGATCCACGTTCTCAAATGGAGCCAACTTTGCAGTGGTTGGGTCCTCTACCCTTCCTGCGTTTGTTCCTTTCGCTTTGAACATCCAGATCATGCAGTTCCTCCATTTCAAGGCTCGCACCCTGGAACTTGTAGCTTCTGGTGCAAGGAATTCTATCGACGATGCCGGGTTTCGAAATGCACTCTACGTGATTGATATTGGACAGAATGACATTGCCGATTCCTTTGCCAAAAACCTTTCATATTCGCAAGTCGTTAAGAGAATCCCAGCGGTTATTGCAGAAATTGAGAGTGCTGTTAAGAGTTTGTACAATGAAGGTGCCAGGAAGTTCTGGGTTCACAACACTGGACCAGTAGGCTGTCTTCCTAAATTAATCTCATTGGCTCAAACAAAGGTTGTAGATTCACTCGGATGTCTTTCCAGATATAATGGTGCTGCAAGATTGTTCAATGAAGCGCTGCTTCATCTGCATCAAAAAGTAAGAACGGAACTGAAAGATGCTACTTTAGTTTATGTGGATATCTATACCATCAAGCTCGACCTCATTACAAATGCGGCCAAATATGGTTTCTCAAATCCATTGATGGCGTGCTGCGGATTTGGAGGCCCTCCCTATAATTTTGACAATAGAGTGACGTGCGGTCAACCTGGTTATCAGGTCTGTGGGGAAGGATCTCGGTATGTGAATTGGGATGGAATTCATTTCACTGAGGCTGCAAATTCGATGGTGGCTTCCAAGATACTTTCCATGGCTTATTCCACACCACGCACGCCTTTCGATTTCTTCTGCCGTCATTGA 1086 0.4678 MAFHSLPLSLQLLFICSFPLPALAQCTKDAVIFVFGDSNSDTGGLASGLGFPINLPNGRTFFHRSTGRLSDGRLIIDFLCQSLNASLLTPYLDALSGSTFSNGANFAVVGSSTLPAFVPFALNIQIMQFLHFKARTLELVASGARNSIDDAGFRNALYVIDIGQNDIADSFAKNLSYSQVVKRIPAVIAEIESAVKSLYNEGARKFWVHNTGPVGCLPKLISLAQTKVVDSLGCLSRYNGAARLFNEALLHLHQKVRTELKDATLVYVDIYTIKLDLITNAAKYGFSNPLMACCGFGGPPYNFDNRVTCGQPGYQVCGEGSRYVNWDGIHFTEAANSMVASKILSMAYSTPRTPFDFFCRH 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4288 361 Pfam GDSL-like Lipase/Acylhydrolase 32 343 IPR001087 GO:0016788
Prci1g4288 361 Gene3D SGNH hydrolase 24 349 IPR036514 -
Prci1g4288 361 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 13 344 - -
Prci1g4288 361 SUPERFAMILY SGNH hydrolase 32 345 - -
Prci1g4288 361 CDD SGNH_plant_lipase_like 32 345 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4288 Prci-Chr1 57284331 57287190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4288 32 350 Acyl Lipid Metabolism Gene Families AT4G10950 27.273 1.63e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4288 - - gmx:100790553 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4288 1 57284331 57287190 Prci1g4288 1 57284331 57287190 ECH