Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4271 ATGGCCAACCATTCTACTTTATGCTTCTTCTTTCTTTATCTCTTCCTCTTCTGCTGCTCGGGAACTCTTGTGGGATTTTCATATCGTGAAAGAGGGGATGCTGGGACCATATCGCTCCTCAGACAAAAAGTGGCACCATTTCAGATTCGAATTTTTGTCACGGATCCTAGAACTTTGAGCGCACTCACCAATTCCCACGAGTCGCTTGATTTCTACCTCAATGAAAACCTCGTAAAAACTTTGGTTCGCTCAAATCCACCTGCAGTTTCGTGGCTGAAAACCCATGTTGTAGATTTTCTCCCAAAAGTTGAAATCAAAAGCGTCATAGCTAGCTGTGGGAATTTAGGCCACAATGAGGTACCATTACTAGTTTCTGTTCTGAAATCTGTTCATTCAGTTCTCAGTAAGCTTCATCTAGGCAGGGAAGTGAAGGTCTCGGTTGCATTTCCTGTGCCATTCTTAGAGAAGTGGAAAGATTCACACGAGAATGATCTTCATAGGATTCTGTCATTTATAAAGGAAACAAATTCCTTTGTCATGATAGAAGACAGCATTGATGGGGAATTAAGCGTAACGGAACGTTTTGTGCAGTCTGCTATAAAACGAGCTGCTCATGCTGCTTCTATCCTTCCTCACATAGATGTTCCCTTGGTTCTCACGATCAAAATCCCAGCAATTCCCAGTTCATTGGAACTAGCTCAATTTAGCCAAACGGTATCCAAACATCTTGAAGCAACAAGCACTAAGGTCAATGGTAAAGCAATTGCATTATATGCAGAAGTACGTGCAATAGAAGCTTTTGAGCATGAAGAACCCAAAAGGGAAGTGGAAGAGATTTTTCCTTTGTCCCGCAGAGAAATCCTAAGCAAAATCCACATCAGAAGAACTCTAGATGACACAACCAACCCGCCAAACGTGGTTTACCCCACAAATCCAACATCAGCAGCACCAGTGATTACACCCCCAGATACACCAACCATAATCACAGTTCCCTCCTCCATTCCTGCTCCCCCCACCAATCCGGCTGCAATGCCTGTGCAAGTTCCTTCCACCACCTCTGTGCCATTGCCTCCCACAAATCCAACCAATCCCGGCACAACCCCGATAACAGTTCCGGGGGCACAACCAGCAACATATTATCCACCCCCATCAGGAGCTGCTCCGGTGAACTCCATTCCACCTCCTGCAAACAGCAATGCTCCGGCCACAGCAGGGCAGAGTTGGTGTGTAGCGAAGACTGGAGCTGCAGAGGCTGCTCTTCAATCAGCACTTGACTATGCTTGTGGAATGGGTGGTGCAGATTGTTCACAAATCCAGCAGGGTGGGAGTTGTTACAATCCAAATTCTCTTGAAAACCATGCTTCCTATGCCTTCAACAGCTACTACCAAAAAAATCCAACACCAACAAGCTGTGACTTTGGAGGGACTGCCACCCTAGTTAACGTAAATCCAAGCTCGGGTTCTTGCATTCTCCCTTCATCCTCTTTCTCTTTCATCGTCAACCCCAACGCCATCATCGCCAACAACAACTACATCATCATCTCCGGGGACAGACACATCAGGCTATGGTACCCCACCTTCAGTGTCAAATTCCAGCGGCAGCTCAGCGTCTGGCGCAGGTACCTCACCATTTTACGGGTACGAAAGTCCTCCAGGTGTAAATACCACGTCCTCATCCCATTCAGCCGGTCTGAAGCCTTTTCTAAGTTTCATTGTACTGGTGATATCATTAATCACTGGAAAACTCAGTACGTGCCCATAGAGATACAACTTTTCCTGGAGGATCATAGAAGGAGAAGCTCAATGCTCTAA 1812 0.4614 MANHSTLCFFFLYLFLFCCSGTLVGFSYRERGDAGTISLLRQKVAPFQIRIFVTDPRTLSALTNSHESLDFYLNENLVKTLVRSNPPAVSWLKTHVVDFLPKVEIKSVIASCGNLGHNEVPLLVSVLKSVHSVLSKLHLGREVKVSVAFPVPFLEKWKDSHENDLHRILSFIKETNSFVMIEDSIDGELSVTERFVQSAIKRAAHAASILPHIDVPLVLTIKIPAIPSSLELAQFSQTVSKHLEATSTKVNGKAIALYAEVRAIEAFEHEEPKREVEEIFPLSRREILSKIHIRRTLDDTTNPPNVVYPTNPTSAAPVITPPDTPTIITVPSSIPAPPTNPAAMPVQVPSTTSVPLPPTNPTNPGTTPITVPGAQPATYYPPPSGAAPVNSIPPPANSNAPATAGQSWCVAKTGAAEAALQSALDYACGMGGADCSQIQQGGSCYNPNSLENHASYAFNSYYQKNPTPTSCDFGGTATLVNVNPSSGSCILPSSSFSFIVNPNAIIANNNYIIISGDRHIRLWYPTFSVKFQRQLSVWRRYLTILRVRKSSRCKYHVLIPFSRSEAFSKFHCTGDIINHWKTQYVPIEIQLFLEDHRRRSSML 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4271 603 Gene3D Glycosidases 24 183 - -
Prci1g4271 603 PANTHER BETA-1,3 GLUCANASE 354 502 IPR044788 -
Prci1g4271 603 Pfam X8 domain 408 478 IPR012946 -
Prci1g4271 603 SMART X8_cls 407 491 IPR012946 -
Prci1g4271 603 FunFam Glucan endo-1,3-beta-glucosidase 4 402 495 - -
Prci1g4271 603 Gene3D - 402 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4271 Prci-Chr1 57190450 57193626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4271 401 485 Glycoside Hydrolase AT5G55180 59.302 3.68e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4271 - - qsa:O6P43_007382 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4271 1 57190450 57193626 Prci3g3661 3 45989018 45990788 CCT
Prci1g4271 1 57190450 57193626 Prci1g4271 1 57190450 57193626 ECH