Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4259 ATGGCCTCCGGCGGCCACATCAACGGCACTGCCGTTTCCCGCTTACCCAAAAAGCTCAAACTCTCTTCTCCTTCTTCTTCGCCTTTCATCACTCGCTCCGAAATCGAATCCGAGTTCTCTCACCACGACCCTGCCGTCGCTCGCCTTAACAACGGTGCCTTCGGGTGCTGCCCCGCTTCTGTTATCTCCGCTCAGCAAGAATGGAATCTCAAGTATCTCAGTCAACCCGACGATTTCTACTTGAACCACCTCCAGAAGGGGATTCTTCAATCCAGAACCATTATCAAAGAGCTCGTTCACGCGGAACTACTTGACGAGATTTCCATCGTCGATAACGCCACAACGGCTGCTGCTATTGTTCTTCAGCAGGTCGCTTGGGCTTTTCACGAAGGCAAATTCCACAGAGGAGATGTCGCCATTATGCTCCATTACACTTATGGAGCTGTCAAGAAGTCAATAGAGGCCTATGTCGTACGTTCTGGAGGTGAAGTCATCGAACGCCTTCCCTTTCCTGTGAGCTCCGATCAGGAGATTATAAGCGAATTTAGGAGGGCGTTGGAAAGAGGAAAGGCTGATGGCAAGAGGGTTAGATTAGCTGTGATCGATCACGTCACTTCAATGCCCAGCGTGGTGATTCCGGTGAAGGAACTGGTTAAGATTTGCAGGGAAGAAAATGTTGAACAAGTTTTCGTGGATGCAGCCCATGCTATTGGGTGTACGGATGTTGATATGAAGGAGATCGGTGCAGACTTCTACACCAGCAATTTGCATAAGTGGTTCTTCTGCCCTCCTTCCATTGCTTTCTTGTATTGTCGCAGGTCACCCAAGTCCTCTGATTTGCACCATCCTGTGGTGTCTCATGAGTATGGCAAGGGGCTGGCCGTAGAATGTTCTTGGATTGGCACGAGGGATTATAGTCCCCAGCTGGTTGCTCCTGCAGTTTTGAGGTTTGTGGACAGATTCGAAGGTGGTATTGAAGGGATTAAGAAGAGGAATCATGATGCTGTCGTAGAGATGGGAGAGATGTTGGCTCAAGCTTGGGGGACTCATCTAGGTACCCCTCCACAAATGTGTGCCAGCATGATCATGGTAGGCCTGCCTGCTTCTCTGGGGATTACTTGTGATTCTGATGCTATCAAGTTAAGGACTCATTTGAGGGGCAATCTTGGGATTGAAGTCCCAATATATTTCAGGACTCCAGAAGATGGAGAGGTTGGCTCTGTGACTGGATATGCTCGAATTTCTCACCAAGTCTATAACAAGGTTGATGATTATTACAAGTTCAGGGACGCAATCAATCAACTCGTACGCGATGGCCTGGATTGTGCGCTTCTGTCTGATTGA 1344 0.4888 MASGGHINGTAVSRLPKKLKLSSPSSSPFITRSEIESEFSHHDPAVARLNNGAFGCCPASVISAQQEWNLKYLSQPDDFYLNHLQKGILQSRTIIKELVHAELLDEISIVDNATTAAAIVLQQVAWAFHEGKFHRGDVAIMLHYTYGAVKKSIEAYVVRSGGEVIELXLPFPVSSDQEIISEFRRALERGKADGKRVRLAVIDHVTSMPSVVIPVKELVKICREENVEQVFVDAAHAIGCTDVDMKEIGADFYTSNLHKWFFCPPSIAFLYCRRSPKSSDLHHPVVSHEYGKGLAVECSWIGTRDYSPQLVAPAVLRFVDRFEGGIEGIKKRNHDAVVEMGEMLAQAWGTHLGTPPQMCASMIMVGLPASLGITCDSDAIKLRTHLRGNLGIEVPIYFRTPEDGEVGSVTGYARISHQVYNKVDDYYKFRDAINQLVRDGLDCALLSD 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4259 448 PANTHER L-CYSTEINE DESULFHYDRASE 27 443 - -
Prci1g4259 448 Pfam Aminotransferase class-V 58 277 IPR000192 -
Prci1g4259 448 Gene3D - 61 365 IPR015421 GO:0003824
Prci1g4259 448 SUPERFAMILY PLP-dependent transferases 41 438 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4259 Prci-Chr1 57137059 57139596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4259 K22207 - qsa:O6P43_007377 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4259 1 57137059 57139596 Prci3g3658 3 45979071 45982817 CCT
Prci1g4259 1 57137059 57139596 Prci1g4259 1 57137059 57139596 ECH