Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4229 ATGAAGTTCTCCCTCTCGCTGCTTCTGCTCCCTCTTGCTCTGGTTTTTGCTGCTGTCATCGCATCTGATCCCGATCCTCTCCAAGACCTCTGTGTCGCTGATCTTACCTCCGCTGTTAAAGTAAACGGGTTCGTGTGCAAGGATGCTTCAAAGGTGAATGCATCAGACTTCTTCTCCAACATGCTAGCCAAACCAGGAGCCACCAACAACACCTTCGGCGCATTGGTCACCGCAGCCAACGTCCAGAAAATCCCTGGACTCAACACCCTCGGCGTCTCACTCTCACGCGTCGACTTCGCGCCTGGTGGCCTCAACCCGCCCCACACTCACCCACGCGCCACCGAGATGATTTTTGTGCTCAAAGGCAAGCTTCTGGTCGGCTTCATAACCACGTCCAATCAGTTCATATCCAAGAAGATTCACAAGGGCGAGATCTTTGTGTTCCCGAAAGGTTTGGTTCATTTCCAAAAGAACGACGGGCATGAAGCTGCCTCTGTAATTGCAGCATACAATAGTCAGTTTGCTGGGACGCAGTCTATCCCCACCACCTTGTTCGCCGCCACACCGGCAGTGCCAGACAATGTTTTGACGAAGGCATTCCAGGTAGGTACCAAGGAGGTTGAGAAAATAAAGTCTAGACTCGCACCCAAGAAGCAGTAG 660 0.5227 MKFSLSLLLLPLALVFAAVIASDPDPLQDLCVADLTSAVKVNGFVCKDASKVNASDFFSNMLAKPGATNNTFGALVTAANVQKIPGLNTLGVSLSRVDFAPGGLNPPHTHPRATEMIFVLKGKLLVGFITTSNQFISKKIHKGEIFVFPKGLVHFQKNDGHEAASVIAAYNSQFAGTQSIPTTLFAATPAVPDNVLTKAFQVGTKEVEKIKSRLAPKKQ 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4229 219 SUPERFAMILY RmlC-like cupins 23 213 IPR011051 -
Prci1g4229 219 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 17 212 - -
Prci1g4229 219 Gene3D Jelly Rolls 22 216 IPR014710 -
Prci1g4229 219 SMART Cupin_1_3 59 208 IPR006045 -
Prci1g4229 219 FunFam germin-like protein subfamily 2 member 1 22 216 - -
Prci1g4229 219 Pfam Cupin 62 207 IPR006045 -
Prci1g4229 219 PRINTS Germin signature 138 158 IPR001929 GO:0030145
Prci1g4229 219 PRINTS Germin signature 108 128 IPR001929 GO:0030145
Prci1g4229 219 PRINTS Germin signature 171 186 IPR001929 GO:0030145
Prci1g4229 219 ProSitePatterns Germin family signature. 103 116 IPR019780 GO:0030145
Prci1g4229 219 CDD cupin_OxOx 23 214 IPR001929 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4229 Prci-Chr1 56921017 56922213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4229 1 218 Miscellaneous Gene Families AT3G05930 51.142 2.25e-79 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4229 - - gmx:100302722 349.362