Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4209 ATGCTTCGATTGAAAGCATTCCGGCCGACCACTGATAAAATCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTCACAGCAGATGCATCAGATCGGGTCTCTGTTTGGAACTGGGAACACCGCCAGGTGATATATGAGCTAAAAGCTGGCGGAGTTGATGAGCGGCGTTTGGTCGGTGCCAAGTTGGAGAAGCTTGCTGAGGGAGAAACAGACTCCAAAGGGAAGCCCACAGAAGCCATTCGTGGAGGGAGTGTTATGCAGGTGAATTTTTATGACGACGATGTACGCTTCTGGCAACTTTGGCACAATCGCTTTGCAGCTGCAGAGGCTCCATCAGCTGTGCATCATCTTACATCAGCTTTTAGCTCCCCTGTCCCATCAACAAAGGGAAGGCATTTTCTTGTTATATGCTGTTCAAACAAAGCTATATTTTTGGATTTGGTGACAATGCGCGGCCGTGATGTACCAAAGCAGGAGCTTGATAACAAATCCCTCCTATGCATGGAGTTCCTTTATCGATCTGGTGGGGGTGATGGCCCTCTTGTTGCTTTTGGTGGATCTGATGGTGTCATTAGAGTTCTCTCAATGATGACCTGGAAGCTTGTGCGAAGATACACTGGAGGTCACAAAGGATCAATCTCTTGCTTGATGTCCTTCATGGCTGCTTCTGGTGAGGGTCTTTTGGTTTCGGGTGCCAGTGATGGATTGCTTGTACTATGGAGTGCAGACCATGTACAAGATTCACGAGAACTTGTTCCAAAACTAAGCTTAAAGGCCCATGATGGTGGGGTTGTGGGAGTTGAGATATCTAGGGTGATTGGAGGTGCTCCTCAGCTTATTACAATTGGTGCTGACAAGACATTAGCTATATGGGACACGGTCTCCTTTAAGGAACTGCGACGTATAAAACCAGTTCCAAAATTGGCTTGCCATAGTGTGGCATCTTGGTGCCATCCTCGAGCTCCCAATCTTGATATTCTTACTTGTGTAAAAGACTCTCATATATGGGCAATTGAACATCCTACTTATTCTGCTCTCACAAGACCGTTGTGTGAATTAACCTCAGTTATTCCTCCTCAAGCTCTTGCATCTAATAAGAAGCTCAGGGTTTATTGTATGGTTGCACATACTTTGCAGCCACATCTTGTTGCTACTGGAACCAATATTGGTGTTATAGTATGTGAGTTTGATCCTAGATCTCTTCCAGCTGTGGCCCCCCTACCAACATCATTAGACAGCCGAGAGCATGCTGCAGTATATGTGGTTGAAAGGGAGCTCAAACTACTAAATTTTCAGCTAAACAATTCGGCAAATCCATCTCTTGGAAATAATAGCTCCTTGTCAGAAACAGGAAGATCTAGGGGTGATTTTGGGGAACCATTACCTATTAAGCTGGGCAGGAAACAAATTAATACGCCTGTTCCACATGATTCATATTCTGTTCTTTCTACGAGCAGTTCTGGAAAGTATTTAGCAATTGTTTGGCCAGATATTCCTTACTTCTCTGTGTACAAGGTTAGTGACTGGTCAATTGTTGATTCGGGCAGTGCAAGGCTTCTTGCTTGGGATACATGTCGTGACAGATTTGCCATATTGGAGTCATCATTACCTCCTAGAATTCCTATTATTCCTAAGGGAGGTTCCTCTAGGAGAGCAAAAGAGGCTGCTGCAGCTGCAGCACAAGCTGCCGCCGCCGCAGCTTCTGCTTCTTCCATGGCATCTGTTCAAGTGCGTATCTTGCTAGATGATGGAACATCTAACATATTAATGAGATCTGTCGGTGCACGTAGTGAACCGGTCATTGGTTTGCATGGAGGGGCTTTGCTTGGTGTTGCCTATCGAACATCTAGGAGAGTCAGTCCAGTTGCTGCTACGGCTATTTCAACAATTCAGTCCATGCCCTTATCAGGTTATGGAAGCGGTGGTCTTTCTTCTTTTACTACTTTTGATGATGGACTTACCTCAAACAGATCTCCAGCTGAGGCAGCTCCCCAAAATTTCCAGTTATACAGTTGGGAGACTTTCCAGCCTGTGGGTGATCTGCTTCCTCAGCCAGAATGGACTGCCTGGGATCAAACTGTTGAGTACTGTGCGTTTGCATACCAACATTACATTGTCATATCATGCTTGCGTCCACAATATAGATACCTGGGAGATGTTGCAATTCCATACGCTACTAGTGCTGTTTGGCACCGAAGGCAACTATTCGTAGCCACACCAACTACTGTAGAAATTGTTTTTGTGGATGCTGGGGTTGCACAAATTGACATAGAAACTAAGAAGATGAAGGAAGAGCAGAAAAGGAAAGAAGCACAAGCAAGAGCAGTAGCTGAGCACGGAGAGTTAGCACTAATTAACGTGGATGGTCCGCAAGCTACTACTGAAGAAAGAATATCATTGAGGCCGCCAATGTTACAGGTGGTGCGATTGGCTTCATTTCAGCATGCTCCTTCTGTGCCACCTTTCATATCGTTGCCAAAACAATCTAGAGTTGATAGTGATGACTCTGGGATGGCAGAAGAAAGGAAGGCCAGTGAAATAGCTGTTGGTGGTGGGGGAGTGTCTGTTGCTGTTACTCGATTCCCAGTGGAGCAGAAACGTCCTGTTGGGCCTCTGGTTGTGGTGGGCGTCAGAGATGGAGTTCTTTGGGTCATTGACAGGTACATGTGTGCACATGCTTTATCCCTGAGTCATCCAGGCATTCGTTGCAGATGTCTTGCTGCCTATGGTGATGCTGTTAGCGCCATAAAATGGGCAAGTAGGCTTGGAAGAGAACACCATGACGATTTAGCTCAATTCTTGCTGGGAATGGGTTATGCAACTGAAGCACTTCATTTGCCAGGAATATCTAAAAGGTTGGAGTTTGATCTAGCAATGAAGAGTAATGATTTGAAGAGGGCTCTTCAGTGCCTTCTTACCATGAGTAATAGCAGGGGCATAGGACAGGATAACACTGGGCTTGGCTTGACAGACATACTTAATTTGACAGATAAAAAAGAAGATGTAGTTGAAGCTGTTCAGGGCATAGTGAAGTTCGCAAAAGAGTTCTTGGATCTTATCGATGCTGCGGATGCTACTGCACAAAGTGAAATTGCACGTGAAGCACTCAAAAGGCTAGCTGCAGCAGGCTCAGTCAAAGGTGCTTTACAAGGTCACGAATTGAGGGGGTTAGCCTTACGCCTTGCAAATCATGGAGAGTTAACACGGCTAAGTGGCTTGGTAAATAACTTGATCACTCTTGGCTTGGGACGGGAAGCTGCTTTTGCTGCTGCAGTTTTGGGAGACAACGCTCTGATGGAAAAGGCATGGCAGGATACTGGGATGCTGGCAGAGGCCGTGCTTCATGCTCATGCACATGGACGCCCGACGTTGAGGAACTTAGTTCAGGCCTGGAACCAAATGCTACAGAGAGAGATCGAGCCTGCTTCATCGCAGAAGACAGATGCTGCAGCTGCATTCCTTGCCTCTTTAGAGGACCCCAAACTTACAAGTTTGGCAGAAGCAGGGAAGAAACCGCCAATTGAAATCCTACCTCCAGGGATGATGTCTCTTTCTGCACCGATCTCCGTTCAAAAGAAACCAACTTCTGCCGCTCAGAATTCACTGCAGCCACCTGGCAAGCCATTGGCATTGGAAGCTCCTCCGACGGCCACAGCAGGGCCACCGAGTGCACCGCCTCCCCAGGAATCTGAATCCACATCTGCACCAGTTACTGATTCAGCTCCATCACAACTTGCCCTAGACTCCCAACCGGATTCAGTGGCTGCTGCATCTCAGCCGGAATCAGGGGAAACCGATGTAGATAAGAAAGAAGCTCCTGCCTCTGCTGCATCAGCAAATGATGCAGTTCAAACTGCCGGCGCTGAAACTGTTCAATCAACGTCTACGAGCAGTCCGGCACCAACACCAACGGAGGGCCCACCGAAATCAGCTGAGGCTCAGGAGGCAAATGTTCCACCTGCAGTATCCGTTGCTGACTTCCTCGCATGA 3996 0.4715 MLRLKAFRPTTDKIVKIQLHPTHPWMVTADASDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETDSKGKPTEAIRGGSVMQVNFYDDDVRFWQLWHNRFAAAEAPSAVHHLTSAFSSPVPSTKGRHFLVICCSNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRSGGGDGPLVAFGGSDGVIRVLSMMTWKLVRRYTGGHKGSISCLMSFMAASGEGLLVSGASDGLLVLWSADHVQDSRELVPKLSLKAHDGGVVGVEISRVIGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVIPPQALASNKKLRVYCMVAHTLQPHLVATGTNIGVIVCEFDPRSLPAVAPLPTSLDSREHAAVYVVERELKLLNFQLNNSANPSLGNNSSLSETGRSRGDFGEPLPIKLGRKQINTPVPHDSYSVLSTSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESSLPPRIPIIPKGGSSRRAKEAAAAAAQAAAAAASASSMASVQVRILLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRVSPVAATAISTIQSMPLSGYGSGGLSSFTTFDDGLTSNRSPAEAAPQNFQLYSWETFQPVGDLLPQPEWTAWDQTVEYCAFAYQHYIVISCLRPQYRYLGDVAIPYATSAVWHRRQLFVATPTTVEIVFVDAGVAQIDIETKKMKEEQKRKEAQARAVAEHGELALINVDGPQATTEERISLRPPMLQVVRLASFQHAPSVPPFISLPKQSRVDSDDSGMAEERKASEIAVGGGGVSVAVTRFPVEQKRPVGPLVVVGVRDGVLWVIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAIKWASRLGREHHDDLAQFLLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALQCLLTMSNSRGIGQDNTGLGLTDILNLTDKKEDVVEAVQGIVKFAKEFLDLIDAADATAQSEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLVNNLITLGLGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLRNLVQAWNQMLQREIEPASSQKTDAAAAFLASLEDPKLTSLAEAGKKPPIEILPPGMMSLSAPISVQKKPTSAAQNSLQPPGKPLALEAPPTATAGPPSAPPPQESESTSAPVTDSAPSQLALDSQPDSVAAASQPESGETDVDKKEAPASAASANDAVQTAGAETVQSTSTSSPAPTPTEGPPKSAEAQEANVPPAVSVADFLA 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4209 1331 MobiDBLite consensus disorder prediction 1232 1262 - -
Prci1g4209 1331 MobiDBLite consensus disorder prediction 1190 1331 - -
Prci1g4209 1331 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 303 IPR001680 GO:0005515
Prci1g4209 1331 Gene3D - 906 1154 - -
Prci1g4209 1331 SUPERFAMILY WD40 repeat-like 5 310 IPR036322 GO:0005515
Prci1g4209 1331 Gene3D - 3 402 IPR015943 GO:0005515
Prci1g4209 1331 PANTHER TSET COMPLEX MEMBER TSTF 1 1257 - -
Prci1g4209 1331 MobiDBLite consensus disorder prediction 1190 1205 - -
Prci1g4209 1331 MobiDBLite consensus disorder prediction 1280 1302 - -
Prci1g4209 1331 SMART WD40_4 200 243 IPR001680 GO:0005515
Prci1g4209 1331 SMART WD40_4 155 197 IPR001680 GO:0005515
Prci1g4209 1331 SMART WD40_4 1 39 IPR001680 GO:0005515
Prci1g4209 1331 SMART WD40_4 252 294 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4209 - - gmx:100777567 2170.2