Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4208 ATGTCGCTAGCGAAAGAGCCAGAACAAGTGATGAAGTTGAGGGGAGGATCGGTGCTGGGAAAGAAGACCATTCTGAAGAGTGACCATTTCCCTGGTTGCCAGAACAAGCGCTTATCTCCTCAGATTGAAGGCGCCCCCAATTATCGCCAGGCTGATTCATTACATGTTCACGGTGTTGCAATCCCAACATTTGACGGGATCAGAAATGTTTTGAAGCATATTAGTGCTCAAAAAGAAGGGACGAGAGTGCAAGTTCTTTGGATTAACCTTCGTGAAGAACCGGTTGTGTACATTAATGGGCGACCCTTTGTTTTGCGTGATGTGGAAAGACCATTTTCCAACCTTGAGTATACGGGAATAAATAGGGAAAGGGTTGAACAAATGGAAGCTCGTCTGAAAGAAGATATCCTAATGGAAGCAGGAAGATATGGAAATAAGATCCTTGTGACTGATGAACTGCCAGATGGCCAGATGGTTGACCAGTGGGAACCAGTATCATGTAATTCAGTGAAAACACCACTAGAGGTGTATGAGGAATTGCAAGCAGAGGGATACCATGTCGATTATGAACGTGTTCCTATAACTGATGAAAAGTCACCAAAAGAACTGGATTTTGACTTTTTGGTTCATAAAATTTCTCAAGCTGATGTAAATACAGAAATTATTTTTAATTGTCAAATGGGGCGTGGACGAACTACAACAGGAATGGTCATTGCAACTTTAATTTACCTCAACCGAATTGGAGCTTCAGGTATTCCAAGAAGCAATTCTGTCGGTAAGATTTCTCAGTGTGCTGCTAATGTGGGTGACCATTTACCTAACTCGGAGGAGGCAGTTCGCAGGGGAGAATATGCAGTCATAAGAAGTCTGATTCGTGTATTAGAGGGTGGTGTTGAGGGGAAAAGACAAGTGGACAAAGTTATCGATAAGTGTGCCTCAATGCAGAATTTACGCGAAGCAATTGCCACCTATCGCAACAGCATTCTGCGACAACCAGATGAAAAGAAAAGGGAGTCATCCCTTTCTTTCTTTGTGGAGTACTTGGAGAGATACTACTTCTTAATCTGTTTTGCAGTATACATTCACTCAGAAAGGGCTGCACTTAATTCTAATTTTGCCAGTCACAGCAGTTTTGCTGATTGGATGAGAGCCAGGCCAGAACTGTACAGTATTATTCGGAGGTTGCTCAGGAGAGATCCAATGGGTGCGCTTGGATATTCCAGTTTGAAGCCATCTCTAAAGAAGATGGCTGAATCTACTGATGGCCGCCCATCTGAGATGGGTGTGGTTGCTGCTCTGAGAAATGGCGAAGTTCTTGGCAGTCAAACTGTTCTAAAAAGTGATCACTGTCCTGGTTGTCAAAACCCAAATTTACAGAGAGTGGAGGGGGCACCGAATTTCAGAGGAGTTCCTGGGTTTCCAGTTTTTGGTGTGGCAAACCCAACCATTGATGGTATTCGATCTGTCATTTGTAGGATTGGTAGCTCTAAAGGCGGGCGTCCTGTACTTTGGCATAATATGAGAGAAGAACCTGTCATATACATTAATGGAAAACCGTTTGTTCTCCGGGAACTTGAAAGACCGTACAAAAACATGTTGGAGTACACGGGAATTGATCGTGAAAGAGTGGAGAAAATGGAAGCTCGGTTGAAAGAAGATATCCTACGGGAAGCTGAACACTATGGCAGTGCTGTATTGGTTATTCATGAGACAGATGATGGGCATATATTTGATGCTTGGGAGCATGTCACATCTCATTCAATTCAAACCCCACTTGAAGTTTTTAAAAGCCTGCAGCGTGATGGTTTTCCTATAAAGTATGCACGTGTCCCCATCACTGATGGTAAAGCTCCTAAAAGTTCTGACTTTGACACAATGGCTGTTAATATAGCATCTTCTCCAAAGGACACTGCTTTTGTTTTCAATTGTCAGATGGGTAGAGGTAGGACAACCACCGGCACTGTCATAGCTTGCCTTGTTAAACTTAGAATTGATTATGGGAGGCCCATCAAAACACTGGTTGACAATTTGCACGTAGCCCATGAAGAAGTAAATGGTAGTTTCTCAAGTGGAGATGAAACAGGGGTTGATATTAATGCATTAATCTCTGATGCTTCTCTAATTAAAATGGATGAGAACCAAAGTCGTGTGTTTGGCATTAATGACATCCTCTTGTTATGGAAGATAACGACATTATTTGATAATGGGGTGGAATGCCGGGAGGCCTTAGATGCTATTATTGATAGATGCTCTGCACTTCAAAACATCCGCCAAGCTGTTCTGCAATATAGAAGAGTATTCAATCAACAGCAGGTTGAGCCTAGAGTAAGGAGGGTGGCCTTGAATCGTGGTGCTGAGTACCTGGAACGTTACTTCCGCCTTATTGCTTTTGCAGCATATCTTGGAAGCGAAGCTTTTGATGGTTTTTGTGGACAAGGAGAATCCAAGATGACATTTAAGACCTGGTTGCATAGGAGGCCAGAGGTGCAGGCTATGAAATGGAGCATCAGACTGAGACCAGGACGATTTTTCTGTGTCCCGGAAGGGTTGAGAGCACCACAAGAGTCTCAGCATGGAGATGCAGTAATGGAGGCAATAGTCAAAGACCGGAATGGTTCTGTTTTGGGGAAAGGCTCCATACTAAAAATGTATTTCTTTCCTGGTCAGAGAACTTCCAGCCACATACAAATACATGGTGCACCAAATGTTTACAAGGTTGATGAATACCCGGTGTATAGCATGGCAACTCCAACCGTCTCTGGTGCCAAGGAGATCCTATCATATTTAGGTGCCAAGCCTAAATCAGGAGATCTGGAAGCTGCAGTTTCTCAAAAAGTTGTATTGATTGATTTGAGGGAAGAAGCGGTTGTTTATATTGATGGTACTCCCTTTGTCTGGCGGGAGTTGAACAAACCTGTTGATACACTCAAGCACGTGGGAATCACTGGTCCTGTGGTGGAGCACATGGAGGCGCGGCTAAAAGAAGATATAATTGCAGAGGTTAAAAAGTCTGGTTGGCGCATGCTACTACATCGTGAGGAGTATAACCCTTCAACTAATCAGTGTGGTGTGGTTGGATATTGGGAGAACATTTCAGCAGATGATGTCAAGACACCTGCAGAACTTTATTCATCTTTGAAAAATGTTGGATATGATATTGTCTACCGGAGGATTCCATTAACAAGAGAGAGAGATGCCTTGGCTTCTGACATAGATGCAATTCAGTATTGTCAAGATGACTCTGCAGGTAGTTACCTATTCTTGTCGCACACAGGTTTTGGTGGAGTTGCATATGCAATGGCAATCATGTGTATTAAACTAGCAATGACAAACTTGGAATCTAAAATCTCACAACTGTGGTATGGTCCCCACATACATCCAATGGTTCTAGAGAATTCGCCTTCCCGAGCTTCTAATGAAGAGGCACTTAGGATGGGCGACTACCGTGACATACTAAGCCTAACTAGAGTACTCGTACATGGTCCCCAAAGCAAAGCAGATGTTGACATTATTATTGAAAGGTGTGCAGGGGCAGGACATTTGCGGGATGATATTATGTATTATAGGAAAGAATTTGAAAAGTTTACCGATGGTGATGACGAGGAACGTGCTCATCTTATGGACATGGGCGTCGAGGCTCTGAGGCGGTACTTCTTCCTGATCACATTCAGATCCTACCTTCACTGCACTTCTCCTGCTAAGATGGAATTTGCGGCGTGGATGGGTGCAAGACCTGAGCTTGGTCATCTATGTAGCAATCTCGGAATTGATAAATAA 3777 0.4342 MSLAKEPEQVMKLRGGSVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRQADSLHVHGVAIPTFDGIRNVLKHISAQKEGTRVQVLWINLREEPVVYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILMEAGRYGNKILVTDELPDGQMVDQWEPVSCNSVKTPLEVYEELQAEGYHVDYERVPITDEKSPKELDFDFLVHKISQADVNTEIIFNCQMGRGRTTTGMVIATLIYLNRIGASGIPRSNSVGKISQCAANVGDHLPNSEEAVRRGEYAVIRSLIRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRNSILRQPDEKKRESSLSFFVEYLERYYFLICFAVYIHSERAALNSNFASHSSFADWMRARPELYSIIRRLLRRDPMGALGYSSLKPSLKKMAESTDGRPSEMGVVAALRNGEVLGSQTVLKSDHCPGCQNPNLXQRVEGAPNFRGVPGFPVFGVANPTIDGIRSVICRIGSSKGGRPVLWHNMREEPVIYINGKPFVLRELERPYKNMLEYTGIDRERVEKMEARLKEDILREAEHYGSAVLVIHETDDGHIFDAWEHVTSHSIQTPLEVFKSLQRDGFPIKYARVPITDGKAPKSSDFDTMAVNIASSPKDTAFVFNCQMGRGRTTTGTVIACLVKLRIDYGRPIKTLVDNLHVAHEEVNGSFSSGDETGVDINALISDASLIKMDENQSRVFGINDILLLWKITTLFDNGVECREALDAIIDRCSALQNIRQAVLQYRRVFNQQQVEPRVRRVALNRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESKMTFKTWLHRRPEVQAMKWSIRLRPGRFFCVPEGLRAPQESQHGDAVMEAIVKDRNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPNVYKVDEYPVYSMATPTVSGAKEILSYLGAKPKSGDLEAAVSQKVVLIDLREEAVVYIDGTPFVWRELNKPVDTLKHVGITGPVVEHMEARLKEDIIAEVKKSGWRMLLHREEYNPSTNQCGVVGYWENISADDVKTPAELYSSLKNVGYDIVYRRIPLTRERDALASDIDAIQYCQDDSAGSYLFLSHTGFGGVAYAMAIMCIKLAMTNLESKISQLWYGPHIHPMVLENSPSRASNEEALRMGDYRDILSLTRVLVHGPQSKADVDIIIERCAGAGHLRDDIMYYRKEFEKFTDGDDEERAHLMDMGVEALRRYFFLITFRSYLHCTSPAKMEFAAWMGARPELGHLCSNLGIDK 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4208 1259 Pfam Inositol hexakisphosphate 950 1106 - -
Prci1g4208 1259 Pfam Inositol hexakisphosphate 88 242 - -
Prci1g4208 1259 Pfam Inositol hexakisphosphate 506 662 - -
Prci1g4208 1259 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 425 1177 - -
Prci1g4208 1259 SMART PTPlike_phytase_2 950 1108 - -
Prci1g4208 1259 SMART PTPlike_phytase_2 88 243 - -
Prci1g4208 1259 SMART PTPlike_phytase_2 506 662 - -
Prci1g4208 1259 CDD PTP_paladin 14 311 - -
Prci1g4208 1259 CDD PTP_paladin 434 751 - -
Prci1g4208 1259 FunFam Paladin isoform A 444 679 - -
Prci1g4208 1259 FunFam Paladin isoform B 883 1122 - -
Prci1g4208 1259 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 8 252 IPR029021 -
Prci1g4208 1259 FunFam Paladin isoform A 24 267 - -
Prci1g4208 1259 Gene3D Protein tyrosine phosphatase superfamily 23 267 IPR029021 -
Prci1g4208 1259 Gene3D Protein tyrosine phosphatase superfamily 883 1120 IPR029021 -
Prci1g4208 1259 Gene3D Protein tyrosine phosphatase superfamily 443 677 IPR029021 -
Prci1g4208 1259 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 430 668 IPR029021 -
Prci1g4208 1259 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 866 1095 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4208 Prci-Chr1 56816278 56827113 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4208 - - gmx:100788113 2145.93