Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4201 ATGGAGTGGCATATATGTGTGAGAAACTTGGTTTTGCCGGCTTTAACGATGGCCTTATTGGTTGCCGCAAATGGGAATTGTTACGAGGGTGGTGACTCGGGCGGCAAATTCGTTCAACGAAGTGGAACCCATTTTATAATGAACGGCAAGCGAGTCTACCTGAACGGGTTCAATGCTTACTGGCTTATGTACATGGCATCTGACCCATCCACAAGATCCAAGGTCACCACCACTTTACAGCAAGCTTCACTCCATGGCTTGAACGTCGCAAGAACCTGGGCTTTCAGCGATGGAGGTTACAAGGCTCTTCAGGTTTCCCCTGGTTCCTACGACGAGAACGTCTTCAGAGGATTGGATTTTGTGATATCTGAAGCTGGAAAATACGGGGTGCGACTCATACTGAGCCTGGTGAACAATTGGAAAGATTTTGGTGGGAAAAATCAGTATGTGAAATGGGCAAGTGAACGTGGCCAGATCAGTGCTGTGAGCAACGAAGATGGCTTCTTTACCCACCTTGTCGTAAAGCAATATTACAAGAATCATATTAAGGCTGTGTTGACTCGAAGGAACACCATAACTGGGGTAGCATATAAAGATGATCCAGCTGTTTTCGCGTGGGAACTAATGAATGAACCTCGTTCTGATAACGATCACTCTGGAAAAATAATTCAGGATTGGGTGAGTGAGATGGCTGCGTACGTAAAGTCTATTGATAGCAATCATTTGCTGGAAATAGGGCTTGAAGGGTTTTATGGGGAATCAATGCCAAATAAGAAGCTGCTCAATCCTGGATACCAATTAGTGGGAACCGATTTCATTTCCAACAATCGAGTCCCTCACATCGATTTCGCCACCGTTCATCTCTACCCAGACCAATGGGTACCGGGGTCAAACGAATCAGCCCAAGCTGCTTTTGTCGACAAATGGGTAGATGCCCATATTGAAGACTGTAATCATATTCTGGGGAAGCCCATTCTGTTGAGTGAGTTTGGGAAGTCGACCAAGTCGGAGGGATACAGCGTGGAGAAGAGAGACAAGTACTTTCAGAAGCTGTACGACGCCGCATACGGCAGCGCGAGGAGCGGAGGATCGTGTGGAGGTGGGCTTTTCTGGCAGGCCATGGCCCAAGGAATGGATGGCTTTCATGACGGATACGAAGTTATGTTTCAGGATAGCTCCTCAACCGTCAATATCATCCGCCAACAATCTCAGCGCATGTCAGCTCTCAATCAGCGATAA 1239 0.4722 MEWHICVRNLVLPALTMALLVAANGNCYEGGDSGGKFVQRSGTHFIMNGKRVYLNGFNAYWLMYMASDPSTRSKVTTTLQQASLHGLNVARTWAFSDGGYKALQVSPGSYDENVFRGLDFVISEAGKYGVRLILSLVNNWKDFGGKNQYVKWASERGQISAVSNEDGFFTHLVVKQYYKNHIKAVLTRRNTITGVAYKDDPAVFAWELMNEPRSDNDHSGKIIQDWVSEMAAYVKSIDSNHLLEIGLEGFYGESMPNKKLLNPGYQLVGTDFISNNRVPHIDFATVHLYPDQWVPGSNESAQAAFVDKWVDAHIEDCNHILGKPILLSEFGKSTKSEGYSVEKRDKYFQKLYDAAYGSARSGGSCGGGLFWQAMAQGMDGFHDGYEVMFQDSSSTVNIIRQQSQRMSALNQR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4201 412 PANTHER - 14 410 IPR045053 GO:0004553
Prci1g4201 412 FunFam Mannan endo-1,4-beta-mannosidase 6 34 410 - -
Prci1g4201 412 Pfam Cellulase (glycosyl hydrolase family 5) 47 349 IPR001547 GO:0004553|GO:0071704
Prci1g4201 412 SUPERFAMILY (Trans)glycosidases 37 399 IPR017853 -
Prci1g4201 412 Gene3D Glycosidases 35 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4201 Prci-Chr1 56805491 56808183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4201 10 411 Glycoside Hydrolase AT5G66460 56.790 2.33e-167 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4201 K19355 - gmx:100787923 592.038