Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4150 ATGTCGACCAAGCAAAGGTTGGAGGGTAAGGTGGCTATAGTGACAGGAGGAGCCAGTGGGATCGGAGCAGAATCAGTGAAATTATTCGCCGAAAACGGAGCATCAGTGGTTGTAGCAGACGTTCAAGATGAACTGGGTCACCAACTCACAGCTTCATTAGCCCCACATCAAGTGAGTTACCATCACTGTGATGTAAGAGATGAGAAACAGGTGGAGCAAACTGTAGCTTTCGCCGTCCACAAGTACGGTCGCCTGGACGTCATGTTTAGCAATGCCGGCATCGTCGGCTCCATGGCCGGCATACTGGATCTCGACCTCAACGCATTTGATAAGACAATGGCCGTCAACGTTAGCGGTGCGGCTGCCACCATCAAGCACGCGGCTCGAGCCATGGTGGCCGCAAACACCCGTGGCTCCATTATCTGCACGGCCAGTGCAGCTGGTTCTGTCGCCGGAAGTGGGCCCCATGCTTACACCACGTCCAAGCATGCTCTTGTGGGCCTTGTCCGTTCAGCTTGCGGCGACCTCGGGGCTTATGGGATCAGAGTGAACTGCGTGTCGCCGTATGCGATTGCCACACCTCTTACGTGTGCAGCGCTCAATAAGGGGGCAGATGAAGTTGAAGCCATTGCCAATTCTTCCGCTAACATGAAGGGAATCTCATTGAAGGCTACCCATATTGCTGAAGCGGCCCTCTTTCTTGCTTCTGATGAATCTGTTTATATCAGTGGCCATGATCTGGTCGTCGACGGAGGCTTCACTGTCCTTAACCCTTTGTGGCTCTTGGCAACGCGTTTCACTTCTTTTCTTGTAATGGCCGTTCTTCTAATTTGGGATAGCGTCAAATATAGTGCCACCATCTTTTACTACTATACTGAGTGGACTTTCACATTAGTTACGATTTATTTTGCGCTGGCAAGCGTAGTATCTGCACATGGATGCTGGCACAACTTAAAACCTGAACATGAGGCAGAAGCCGATTATCTCAGAAGAGATTTAGAAGAGAGTATGTCCTCGAAGACTGCGACATTTAAAGGGAAAGAAACGTGGGGTTCCATGAAGTTGCAGAGCCGATATGCCGAAGAGGAATTTTTACAGAGAGCAGGATTTTGGGGTTACCTCATGCAAATCATATATCAGATATGTGGAGGGGCCGTGATCATCACAGACATTGTATTTTGGTGTGTCATAGTACCATTCTTGTCAATCGCCCATTTGAAGCTAAGCCCGCTGATGGGTTGCATGCATACCTTGAATATAGCTTTCCTGCTTGTGGATACCGCTCTAAATAATCTTCCATTTCCCTGGTTTAGAATGGCTTACTTTGTGCTGTGGAGCTGTGCCTACATCATCTTCCTCTGGATCGCTCGTGCCTGTGGCCTTTCATGGTGGCCATATCCATTCCTGGAGCTTGACATCCCATGGGCTCCCCTATGGTACTTCTTCTTGGCTGTGTTCCACATACCCTGCTATTTGTTGTATGTACTCATTGTGAGAGCTAAACATAAGATTCTGGCAAAATTGTTCCAGGATGCATTTTTAAGGCCATAA 1551 0.4874 MSTKQRLEGKVAIVTGGASGIGAESVKLFAENGASVVVADVQDELGHQLTASLAPHQVSYHHCDVRDEKQVEQTVAFAVHKYGRLDVMFSNAGIVGSMAGILDLDLNAFDKTMAVNVSGAAATIKHAARAMVAANTRGSIICTASAAGSVAGSGPHAYTTSKHALVGLVRSACGDLGAYGIRVNCVSPYAIATPLTCAALNKGADEVEAIANSSANMKGISLKATHIAEAALFLASDESVYISGHDLVVDGGFTVLNPLWLLATRFTSFLVMAVLLIWDSVKYSATIFYYYTEWTFTLVTIYFALASVVSAHGCWHNLKPEHEAEADYLRRDLEESMSSKTATFKGKETWGSMKLQSRYAEEEFLQRAGFWGYLMQIIYQICGGAVIITDIVFWCVIVPFLSIAHLKLSPLMGCMHTLNIAFLLVDTALNNLPFPWFRMAYFVLWSCAYIIFLWIARACGLSWWPYPFLELDIPWAPLWYFFLAVFHIPCYLLYVLIVRAKHKILAKLFQDAFLRP 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4150 516 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 257 - -
Prci1g4150 516 Pfam Enoyl-(Acyl carrier protein) reductase 16 254 - -
Prci1g4150 516 Gene3D - 1 262 - -
Prci1g4150 516 FunFam Short-chain dehydrogenase reductase 1 259 - -
Prci1g4150 516 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 255 IPR036291 -
Prci1g4150 516 PRINTS Glucose/ribitol dehydrogenase family signature 11 28 IPR002347 -
Prci1g4150 516 PRINTS Glucose/ribitol dehydrogenase family signature 83 94 IPR002347 -
Prci1g4150 516 PRINTS Glucose/ribitol dehydrogenase family signature 217 237 IPR002347 -
Prci1g4150 516 PRINTS Glucose/ribitol dehydrogenase family signature 132 148 IPR002347 -
Prci1g4150 516 PRINTS Glucose/ribitol dehydrogenase family signature 158 177 IPR002347 -
Prci1g4150 516 PRINTS Glucose/ribitol dehydrogenase family signature 179 196 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4150 Prci-Chr1 56459518 56464813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4150 6 255 Acyl Lipid Metabolism Gene Families AT3G55290 30.038 8.66e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4150 - - pcin:129310503 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4150 1 56459518 56464813 Prci1g4150 1 56459518 56464813 ECH