Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4142 ATGGACGGCATTGGTGGAGGAGGAAGCTGCAGAAAGAGAAAGAAGTGCGACCACCCGCCGGTCGAGGAAGACGATGCTGACGATGAATCAAAGATGGACAAGTTCTTTGATCTGATCCTCAACCTCGGAGAGAGCCTCAAGCGCCGCGTTGGCGGCTGGCCATTGCAGAGAACCGCTGGAACAAGAGGATCAAGAGAGGGTGGGAACCCCCGTTTGAACTCCAAGATTTCGCCGGCAATCATGGCGTTGCCGCAGATCCTCTTTCACAGCTCTTTGTTAGGATTTTCTGTTCCCGATCCACCTCCGCAAAGATATCGAAACGAACAATTTGGCACTGGCCTTCCGTTACGCTTGCGTGATCAGTTTTTGTCCTTCTTGGTTGAAACACCTGCGAAGCGTTCAGTTCGTGGCTCTGCTTTGGAAATAATGACATCTACGATGACTAGATCGCAGCTTCTTAGCCCTCCAAGTTCTCATCTCATAAAATTCGAACTCCCTTTTAAAGATTACAGATCGCTTGCCCAGAGCTTTCGTAGTTCTGAATTTCCTACCCTCGCCCTGAGACACAGACGTAACGCCCCGACCTCAATTTTCCCCAAAATCAGAGCTCAGAGTCTTCCCGATTATGTACCCGATTCCGAGTTTTACAAGGTGGAAGCGATTCTCAGGCCTTGGCGAATCCCTCAGGTTTCTTCGGCTTTGTTGAAAATGGGAATTCGTGGCGTCACAGTATCTGATGCCCGGGGCTTTGGATCTCAGGGTGGTTCACAAGAGAGGCAGGGAGGCTCTGAATTTTCTGAAGACAATTTTGTCGCCAAAGTTAAGATGGAGATAGTAGTGAGCAGGGGTCAGGTTGAAGCAGTTATAAACAAGGTTATCAAGACATCGAGAACAGGGGAGATTGGTGATGGCAAAATTTTTTTGACACCTGTTGCAGATGTTATAAGAGTTCGCACAGGTGAACGTGGGGAAATTGCGGTGAGGATGGCTGGCGGGCCAGCTTCTGCTGTATGA 1014 0.4941 MDGIGGGGSCRKRKKCDHPPVEEDDADDESKMDKFFDLILNLGESLKRRVGGWPLQRTAGTRGSREGGNPRLNSKISPAIMALPQILFHSSLLGFSVPDPPPQRYRNEQFGTGLPLRLRDQFLSFLVETPAKRSVRGSALEIMTSTMTRSQLLSPPSSHLIKFELPFKDYRSLAQSFRSSEFPTLALRHRRNAPTSIFPKIRAQSLPDYVPDSEFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDARGFGSQGGSQERQGGSEFSEDNFVAKVKMEIVVSRGQVEAVINKVIKTSRTGEIGDGKIFLTPVADVIRVRTGERGEIAVRMAGGPASAV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4142 337 MobiDBLite consensus disorder prediction 7 21 - -
Prci1g4142 337 Gene3D - 204 337 IPR015867 -
Prci1g4142 337 ProSiteProfiles P-II protein family profile. 215 327 IPR002187 GO:0006808|GO:0030234
Prci1g4142 337 Pfam Nitrogen regulatory protein P-II 216 323 IPR002187 GO:0006808|GO:0030234
Prci1g4142 337 ProSitePatterns P-II protein C-terminal region signature. 298 311 IPR017918 GO:0006808|GO:0030234
Prci1g4142 337 SUPERFAMILY GlnB-like 216 327 IPR011322 -
Prci1g4142 337 PRINTS P-II protein signature 216 231 IPR002187 GO:0006808|GO:0030234
Prci1g4142 337 PRINTS P-II protein signature 267 290 IPR002187 GO:0006808|GO:0030234
Prci1g4142 337 PRINTS P-II protein signature 298 318 IPR002187 GO:0006808|GO:0030234
Prci1g4142 337 PRINTS P-II protein signature 237 255 IPR002187 GO:0006808|GO:0030234
Prci1g4142 337 MobiDBLite consensus disorder prediction 1 29 - -
Prci1g4142 337 PANTHER NITROGEN REGULATORY PROTEIN P-II 180 334 IPR002187 GO:0006808|GO:0030234
Prci1g4142 337 SMART P_II_3 218 320 IPR002187 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4142 Prci-Chr1 56383087 56402647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4142 - - pcin:129302804 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4142 1 56383087 56402647 Prci1g4142 1 56383087 56402647 ECH