Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4129 ATGGCAAATAGACCTGATCCAGATATTGATGACGATTTTAGTGAACTTTACAAGGAGTACACTGGCCCTCCTGGAACTGCTACTACTAATTCCCTAGAGAAGACAAAGTCAAACAAGAGGTCTCATGCAGGGTCTGACGAGGAGGAGGAGCCTCGTGACCCTAATGCTGTCCCAACTGATTTCACTAGCCGAGAAGCCAAGGTCTGGGAGGCTAAGTCAAAGGCTACTGAGAGGAACTGGAAGAAAAGAAAAGAAGAAGAAATGATCTGCAAACTTTGTGGTGAATCTGGGCATTTCACTCAGGGTTGCCCATCTACACTAGGAGCCAATCGCAAGTCTCAAGATTTCTTTGAAAGAGTACCAGCAAGAGACAAACATATGAGAGCACTTTTCACAGAGAAAGTTATAAGCAAGATTGAGAGGGATATTGGATGCAAGATAAAGATGGATGAGAAATTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCTGTACACAAGATTAGAGAGGAGGGCAATCAAAGGGGGTCTTCTAGTTCTCACATGACCACATCTAGGTCACCTGAGAGAAGTCCTGCTGGTGGACGGTTTCAACGCTCTGAGCCCCCAAGGTCTCACTCTGGACCTCGTAATACTACTCATTTTCAACAGAGGTTTGGTAGGCAAGAGAGGGTTGTTGAAGACCGTGTAAGAGAGGACTTTCAAAAATTTCCAAGAGGTTCTCCACAAGCTTTTGGAAATAGTGGGGGTAGAGGTCGTCCGAGCCATTCAAGATCTCCTAGAGAAGCACCTTATACAGGCAACCCATATAATTCATATGATGACCGTAATCTAAACATGGGCACATACAGAAATGATGGATGGGATTCACAAGCTAGAGAATCTGATATCCAATCTGGTCATCAGTTTGATTGCAATGCCTTCCCACAGACATTAGAAGAATTAGAGATGGAGTATAAAAGGGAGGCCACAGAGCTTGGAAGAATCCGTGATAGAGAAGAAGATGAAGAAAATTTTAGGCATCGTGAGGCTGTTAGAGATACGAGGGAGAACTACATGAACAAAGTAGCTATGCTGAGGGCCACACATGCCAAACAGTGGGAAGAATTTCTTCAGCTTGATGCCCAGAGGCGTCAACAGCAGGCTGTCCAACAAATGCCTACATCTGGTTTTGGGGGTTATAAACAGCAGAACTTTTCTGAATATGATGGATCCACAACCAACCCTCATTATACTGGGGCCAGCTTACCCTTGGAATTGAGGAACAGGTTCTCAAACACTATGGAAAACTATCCTACCAGGCGTCATGAGAATTTTGGTGAATTTCAGAGGCGTGGAGATTTTCCGAAAGCTTACAACAGATATTAA 1386 0.438 MANRPDPDIDDDFSELYKEYTGPPGTATTNSLEKTKSNKRSHAGSDEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERVPARDKHMRALFTEKVISKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGNQRGSSSSHMTTSRSPERSPAGGRFQRSEPPRSHSGPRNTTHFQQRFGRQERVVEDRVREDFQKFPRGSPQAFGNSGGRGRPSHSRSPREAPYTGNPYNSYDDRNLNMGTYRNDGWDSQARESDIQSGHQFDCNAFPQTLEELEMEYKREATELGRIRDREEDEENFRHREAVRDTRENYMNKVAMLRATHAKQWEEFLQLDAQRRQQQAVQQMPTSGFGGYKQQNFSEYDGSTTNPHYTGASLPLELRNRFSNTMENYPTRRHENFGEFQRRGDFPKAYNRY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4129 461 MobiDBLite consensus disorder prediction 210 225 - -
Prci1g4129 461 Coils Coil 318 338 - -
Prci1g4129 461 MobiDBLite consensus disorder prediction 226 242 - -
Prci1g4129 461 MobiDBLite consensus disorder prediction 1 17 - -
Prci1g4129 461 MobiDBLite consensus disorder prediction 267 305 - -
Prci1g4129 461 MobiDBLite consensus disorder prediction 175 305 - -
Prci1g4129 461 MobiDBLite consensus disorder prediction 35 55 - -
Prci1g4129 461 PANTHER OS01G0252900 PROTEIN 1 461 - -
Prci1g4129 461 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Prci1g4129 461 MobiDBLite consensus disorder prediction 1 76 - -
Prci1g4129 461 MobiDBLite consensus disorder prediction 181 197 - -
Prci1g4129 461 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4129 Prci-Chr1 56312212 56317570 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4129 - - gmx:100816979 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4129 1 56312212 56317570 Prci1g4129 1 56312212 56317570 ECH