Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4125 ATGGCTCCCCCCAACGACCCTGTCTTGAACTTCATGCCCACCGAATCTTTGGAAAAAAATTGGGTGCTGTCTGAGGGGAAGCTTTCCGTCAGAGGCGTGCCATTGCTCACTCACGTCCCTGACAACGTCACTTTCAGTCCCTTCTCTCAAATATGTCAATCCTCTGACGCTCCTCCTGCTTTGCTTCAGAGGGTGGTGGCTCAATATCACAAGGGCGGATTCCTTGGGTTCTCCCAGAAAGAGCCGTCTGATAGGTTGATGAATTCCTTGGGTAGTTTCAGCGATAGAGAGTTCTTAAGTATCTTCAGGTTCAAAACTTGGTGGTCTACCCAGTGGGTGGGAAATTCAGGCTCTGATCTACAGATGGAAACCCAATGGGTGCTCTTTCATCTTCCTGAGATTAAGTCCTACGCCGTCATCATTCCTATCATTGAAGGAAGTTTCAGGTCTGCCCTTCATCCTGGCTCTGACGGCCACGTCAAGATTTGCGCCGAGAGCGGGTCTACCCAAGTGAAGGCATCGAGTTTCCATGCCATAGCTTACATTCACGCGACAGAAAATCCCTTCAACTTGATGAAAGAGGCCTACACTGCTCTGAGGGTACACCTCAATACTTTCAGGCTCTTGGAAGAGAAATCCACGCCGAGTCTGATTGGTAAATTTGGGTGGTGCACGTGGGATGCATTCTACCTAACCGTTAACCCCGTCGGAATATGGCACGGGCTGAAAGATTTCGCCGCTGGTGGGGTGTCTCCGAGGTTTCTCATCATCGATGATGGTTGGCAGAGCATAAATTTGGATGGTAAAGACCCGAATGAGGACGCTAAAAATCTTGTTTTAGGTGGCGAGCAAATGACCGCAAGGCTTCACAGACTCGACGAAGGTGATAAGTTCAAAAAGTACAAGGGTGGCCTCATGTTGAGTCCTAATGCTCCTTCAATGGATCCTAAAATGATCAAAGTCCTTATCAACAAGGGAATTGAACTTGAGCATCTGCAGAAGGAACGTTACCACGCATTTGAATCCGCGAGCCCGAATCTGTCCCAGATCGAAACGGGGATCCAGAAGGTGAAAAAAGAAATCAATGATCTTTGGCGAGAGCTAGACAGCGGTTCAAACAAAGAATGTGGAAGCATGTGCGGGGAAACAGACGAGTATGGAATGAAGGCTTTCACAAGGGATTTGAGGTCTAAATTCAGAGGTCTGGATGACATTTATGTTTGGCATGCCCTTTGTGGTGCTTGGGGTGGCGTGAGGCCAGCAGCAACGCACCTGAACTCGAAGGTTATCCCATGCAAACTCTCCCCAGGTCTCGATGGAACGATGCATGATCTTGCTGTGGTGAGAATCGTCGAAGGTTCGATTGGGCTTGTTCACCCGGATCAAGTCAATGACTTTTATGACTCTATGCATTCCCATCTAGCCAAATCCGGTATTACGGGAGTCAAAGTTGATGTCATTCACACTCTTGAGTATGTGTGCGATGAATATGGAGGCAGAGTAGAGCTTGCCAAGGCTTACTATGATGGGCTGTCAAACTCCATTGCGAAGAATTTCAATGGAAATGGAATCATTGCTAGCATGCAACAGTGCAATGACTTTTACTTCCTCGGGACAAAGCAGGTGTCTTTGGCAAGAGTTGGGGATGACTTTTGGTTCCAAGATCCGAATGGTGATCCAATGGGAGTATTCTGGTTGCAAGGGTTACATATGGTTCACTGCGCTTATAACAGCCTGTGGATGGGGCAAATGGTTCAGCCTGATTGGGACATGTTCCAGTCAGACCATGTGTGTGCCAAATTCCATGCAGGTTCAAGGGCCATTTGTGGTGGCCCGATCTATCTGAGTGACTCGGTAGGTTCTCATGATTTTGATCTCATCAAGCAGCTTGTTCATCGTGATGGCACCGTACCAAAGTGCATTCATTTCCCTCTTCCAACTAGAGATTGCCTTTTCAAGAACCCTCTGTTTGACCAGAAAACCGTCCTCAAGATCTGGAACCTCAACAAGTATGGTGGGGTGGTTGGTGCTTTCAACTGTCAAGGTTCCGGTTGGGATACCAAAATGCATAAATTTAGGGGCTTCCCTGAGTGTTACAAGCCTGTATGTAGCTCAGTACATGTCTCTGAGATTGAATGGGACCAGAAGAAAGAAGCAGCCCACATGGGTGTGGCGAAGGAATACATAGTGTACATGAATCAAGCTAAGGAACTGTGTGTGATCATGACCCAGAAGTCTAAACCATTGCAAATTTCCATCCAGCCTTCTACGTTTGAGCTCTTCAGCTTTGTCCCGGTCACCGAGCTAAAGCGCGGCATCAAATTCGCAGCCATTGGGCTAACGAACATGTTCAATAGTGGAGGGACAATTCAAGAAATGGAATGCTCTGAGGATGGTGTGAGGCTCCAGGTTAAAGGTGAAGGAACTTTTCTTGCTTACTCAAGCGAGTCTCCTGAGAAGTGTGAGTTGAATGGTGATGAGGTACCGTTTGAGTGGCTGCCTGCTGGCAAAGTGAGGCTCAACCTTGCTTGGGAGGAAGAGGCTGGGGGGGTTTCTGATTTAGAATTTTTCTACTAG 2577 0.4777 MAPPNDPVLNFMPTESLEKNWVLSEGKLSVRGVPLLTHVPDNVTFSPFSQICQSSDAPPALLQRVVAQYHKGGFLGFSQKEPSDRLMNSLGSFSDREFLSIFRFKTWWSTQWVGNSGSDLQMETQWVLFHLPEIKSYAVIIPIIEGSFRSALHPGSDGHVKICAESGSTQVKASSFHAIAYIHATENPFNLMKEAYTALRVHLNTFRLLEEKSTPSLIGKFGWCTWDAFYLTVNPVGIWHGLKDFAAGGVSPRFLIIDDGWQSINLDGKDPNEDAKNLVLGGEQMTARLHRLDEGDKFKKYKGGLMLSPNAPSMDPKMIKVLINKGIELEHLQKERYHAFESASPNLSQIETGIQKVKKEINDLWRELDSGSNKECGSMCGETDEYGMKAFTRDLRSKFRGLDDIYVWHALCGAWGGVRPAATHLNSKVIPCKLSPGLDGTMHDLAVVRIVEGSIGLVHPDQVNDFYDSMHSHLAKSGITGVKVDVIHTLEYVCDEYGGRVELAKAYYDGLSNSIAKNFNGNGIIASMQQCNDFYFLGTKQVSLARVGDDFWFQDPNGDPMGVFWLQGLHMVHCAYNSLWMGQMVQPDWDMFQSDHVCAKFHAGSRAICGGPIYLSDSVGSHDFDLIKQLVHRDGTVPKCIHFPLPTRDCLFKNPLFDQKTVLKIWNLNKYGGVVGAFNCQGSGWDTKMHKFRGFPECYKPVCSSVHVSEIEWDQKKEAAHMGVAKEYIVYMNQAKELCVIMTQKSKPLQISIQPSTFELFSFVPVTELKRGIKFAAIGLTNMFNSGGTIQEMECSEDGVRLQVKGEGTFLAYSSESPEKCELNGDEVPFEWLPAGKVRLNLAWEEEAGGVSDLEFFY 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4125 858 PANTHER - 22 847 IPR008811 -
Prci1g4125 858 Pfam Raffinose synthase or seed imbibition protein Sip1 23 841 IPR008811 -
Prci1g4125 858 SUPERFAMILY (Trans)glycosidases 220 269 IPR017853 -
Prci1g4125 858 SUPERFAMILY (Trans)glycosidases 361 632 IPR017853 -
Prci1g4125 858 Gene3D Aldolase class I 216 633 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4125 Prci-Chr1 56258643 56262085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4125 23 858 Glycoside Hydrolase AT4G01970 58.118 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4125 K06611 - gmx:100815922 1369.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4125 1 56258643 56262085 Prci1g4125 1 56258643 56262085 ECH