Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4119 ATGGAAGATTTAGGTGGTACCCGATTTGATGGCCTTGGCAGTGCAGCAAGGAAGAAACGCAGTCAAACTTCTCGCCGGCCTCGGCCAGATTCACAGCCCATTTCTGATGGCCCATCTCCCTTATCATCAACACCTTCAGATGATGCAAGCAAGGCCTCTAGTGATGAGAATAGTGGTTGTGATAATAATCCTAAGAGAAAAGAATTTAATCTCAACCATTATGTTTCCAGTGTCCCCTCTGCTGCTGCAGCTGAAGATGATAAACTCTGGAAGAAGAGTAGAACGGATGGAGAATTCCATTTGTTTTTCAATAATGAACCTGGACATGTTTTATATAACAAGCGGCGTAGCGAGGGTGTCCTTGCTCCTGCTAACTGGAAAGGCTCTAGCAAATCAAAGGATAGCTTTGAATCAGAATCAAGAGGTGCAGATATATATAGTATGAACTTGGGGCAACCAGGAGCTTTTCAGGATGGCTCGGAGAATGATAACAGGGTCAAAAAGGTTAAACTCAGGGTTGGTGGTGTAATGTGTATGATCCAAGCTAACTCTACTCCTAATGGTTCATCAAGCAGTGGCACCACTGCAAAGAGCTCCCAATTGTCAGATGTCTACAGACCACGCCCAAAGCAACAGGGAAATTCAGATGATAACCAGTCCCCTTCAGATAAGAGGAGTGGCCTACAAGGCATTCCATGGAAGAATTTCTCAAGGGAAGGGTTTGGTGTTGGAAAGGTGGATTCTATGATAGGGAAGATGTCAGGAAAGAACACGTCCAGTAAGCAAGGTGACAAGACTGAACCAATTCGTAAGAGCAAGCGAGTACCAAAGAGGCGTGTGTTGGATGGTGAATTCGGTGGTGATGACGACGACGACGAGATTCGCTATTTGGAAAAGCTCAAAACGACAAAAGTTTCTGCAGTGTATAGAGATGAAGAAGAAGTAAGCAAGAAACATCGAAAATTGTCTAGTGTCTCTGATATGGAAACTACTGCCTCATCAAGGTCAGTCAAAGATGGTAAAAGCAAGTCCACATCGGATAGAATGTACGAAGATACGGATTATGAGGAAGATGAGGATTCTGGGTCTGATGTTGAGCCTGAGCACAAGAAAAAGAGAAAGCAGAAGAAGGAATCTGTTGATGTGTTGATGGATAGTAAGAGGGAAATGACTCTCACTACACGCCAAAGGGCTCTTCAATCAAGCAAAGATGCATCTGTATACGGTGCAAGTTTAATTGAGTTTCCTAATGGATTACCACCTGCTCCACCTAGAAAGCAAAAAGAAAAGCTTTCAGAGGTGGAGCAGCAACTAAAGAAAGCTGAGGCTGCCCAGAGGCGTAGAATGCAAGTTGAGAAGGCTGCTAGGGAATCTGAGGCTGAAGCTATCAGAAAAATACTTGGTCAAGACTCCAGCAGGAAGAAACGGGAAGAGAAAATGAAGAAACGCCAAGAAGAACTGGCACAGGAGAAGGCAGCTAATGCGCAGATGCTCGCATCAAACACCATCAGATATGTGATGGGTCCTGCTGGAACGCTTGTTACTTTTCCTGAGGAGATGGGCCTGCCAAGCATTTTCAGCTCCAAACCCTCCAGTTATCCACCTCCGCGTGAGAAATGCGCGGGTCCATCTTGCGCCAACCCGTACAAGTATCGGGATTCAAAGTCCAAGCTTCCTCTTTGCAGTCTGCAGTGCTACAAGGCAGTCCAGGAGACGTTGACGGCTGCAACCATCTGTTGA 1740 0.4563 MEDLGGTRFDGLGSAARKKRSQTSRRPRPDSQPISDGPSPLSSTPSDDASKASSDENSGCDNNPKRKEFNLNHYVSSVPSAAAAEDDKLWKKSRTDGEFHLFFNNEPGHVLYNKRRSEGVLAPANWKGSSKSKDSFESESRGADIYSMNLGQPGAFQDGSENDNRVKKVKLRVGGVMCMIQANSTPNGSSSSGTTAKSSQLSDVYRPRPKQQGNSDDNQSPSDKRSGLQGIPWKNFSREGFGVGKVDSMIGKMSGKNTSSKQGDKTEPIRKSKRVPKRRVLDGEFGGDDDDDEIRYLEKLKTTKVSAVYRDEEEVSKKHRKLSSVSDMETTASSRSVKDGKSKSTSDRMYEDTDYEEDEDSGSDVEPEHKKKRKQKKESVDVLMDSKREMTLTTRQRALQSSKDASVYGASLIEFPNGLPPAPPRKQKEKLSEVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKMKKRQEELAQEKAANAQMLASNTIRYVMGPAGTLVTFPEEMGLPSIFSSKPSSYPPPREKCAGPSCANPYKYRDSKSKLPLCSLQCYKAVQETLTAATIC 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4119 579 Pfam PAPA-1-like conserved region 435 520 IPR006880 GO:0031011
Prci1g4119 579 Coils Coil 473 494 - -
Prci1g4119 579 MobiDBLite consensus disorder prediction 27 59 - -
Prci1g4119 579 MobiDBLite consensus disorder prediction 181 226 - -
Prci1g4119 579 MobiDBLite consensus disorder prediction 124 166 - -
Prci1g4119 579 MobiDBLite consensus disorder prediction 263 285 - -
Prci1g4119 579 MobiDBLite consensus disorder prediction 439 489 - -
Prci1g4119 579 SMART PAPA_1_2 435 520 IPR006880 GO:0031011
Prci1g4119 579 MobiDBLite consensus disorder prediction 292 325 - -
Prci1g4119 579 PANTHER INO80 COMPLEX SUBUNIT B 7 574 IPR029523 GO:0006338|GO:0031011
Prci1g4119 579 MobiDBLite consensus disorder prediction 364 392 - -
Prci1g4119 579 Pfam HIT zinc finger 536 567 IPR007529 -
Prci1g4119 579 MobiDBLite consensus disorder prediction 181 403 - -
Prci1g4119 579 Coils Coil 427 461 - -
Prci1g4119 579 MobiDBLite consensus disorder prediction 334 350 - -
Prci1g4119 579 MobiDBLite consensus disorder prediction 439 493 - -
Prci1g4119 579 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4119 Prci-Chr1 56224750 56228821 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4119 - - gmx:100814323 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4119 1 56224750 56228821 Prci1g4119 1 56224750 56228821 ECH