Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4084 ATGTTGTGGCTCATGCGATTCTCGGGATTTTTCTCTGCCGCAATGGCTCTGGTTGTTCTCTCTCCATCTCTGCAATCGTTTCCTCCGGCGGAAGCCATCAGATCCTCCCACCTCGACGGATATCTCCGTTTGCCAGTCCAGATGCCCCCCACCGATAGTGAAAACCGATTTTCATTCCGGAAAGCCTCTGCATTCCGCAATGCCGATAAATGTGGTTCGAATCAAAGGGAGGTTTCGGGGGAAATGAGTGTTTGCGATCCTTCTTTGGTACACGTGGCGATAACACTCGACATTGAATACCTCCGCGGTTCAATCGCGGCTGTGCACTCCATTCTGCAGCATTCCTTGTGCCCGGAAAGCATCTTCTTTCACTTCCTCGTGTCGGAAACAAATCTGGAGTCGATAGTTCAATCGACGTTCCCCCAGTTGAAGTTCAAGGTGTATTACTTCGATCCAAAGATTGTAAGGAACCTGATCTCGACCTCTGTTAGGCAAGCGCTTGAACAACCCTTGAATTATGCCAGGAATTACTTGGCGGATCTTCTGGAGGGTTGCGTGAGCAGAGTGATTTACCTGGATTCTGATCTAGTCGTGGTTGATGATATATCCAAACTGTGGAGTACGAGCTTGGGTTCTAAAACAATCGGGGCACCGGAATACTGCCATGCCAACTTCACCAAGTATTTCACGGCAGGATTCTGGTCAGACAAGCGGTTCTCCGCCACTTTTGCGCGGCGGAAACCGTGCTATTTCAACACAGGAGTGATGGTTATAGATCTAGTCAAATGGAGGAAAGCCCGGTACACGAAGCATATCGAAAGATGGATGGAAATCCAGAAGAGCGATCGGATCTACGAGCTGGGTTCACTTCCGCCGTTCCTACTGGTTTTCGCAGGACACGTGGCACCCATCGAGCACCGGTGGAACCAGCACGGCCTGGGTGGTGATTACGTCAGAGGCAGCTGTCGAGATTTGCACCCAGGTCCAGTTAGCCTGTTGCATTGGTCCGGTAGCGGCAAGCCATGGCTCAGGTTGGACTCCAAACGGCCCTGCCCACTCGACGCCCTATGGGCTCCTTACGATTTGTACGGTCACACCCTCTGA 1104 0.5163 MLWLMRFSGFFSAAMALVVLSPSLQSFPPAEAIRSSHLDGYLRLPVQMPPTDSENRFSFRKASAFRNADKCGSNQREVSGEMSVCDPSLVHVAITLDIEYLRGSIAAVHSILQHSLCPESIFFHFLVSETNLESIVQSTFPQLKFKVYYFDPKIVRNLISTSVRQALEQPLNYARNYLADLLEGCVSRVIYLDSDLVVVDDISKLWSTSLGSKTIGAPEYCHANFTKYFTAGFWSDKRFSATFARRKPCYFNTGVMVIDLVKWRKARYTKHIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDYVRGSCRDLHPGPVSLLHWSGSGKPWLRLDSKRPCPLDALWAPYDLYGHTL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4084 367 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 351 IPR029044 -
Prci1g4084 367 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 18 364 - -
Prci1g4084 367 FunFam Hexosyltransferase 91 351 - -
Prci1g4084 367 Pfam Glycosyl transferase family 8 91 344 IPR002495 GO:0016757
Prci1g4084 367 SUPERFAMILY Nucleotide-diphospho-sugar transferases 90 364 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4084 Prci-Chr1 55916696 55918481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4084 1 365 Glycosyltransferase AT3G62660 80.548 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4084 - - qsa:O6P43_007218 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4084 1 55916696 55918481 Prci1g4084 1 55916696 55918481 ECH