Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4076 ATGGAGTCCTGCGATTGCGTTGAGCCACAGTACTGGCCCCTAGATGAACTTCTCAAGAAATGTCAGTACATGTCGGATATTCTGATAGCGCTTGCGTATTTCTCCATTCCTTTGGAGCTGATATATTTTGTTCAGAAGTCTGCATTCTTCCCATATAGATGGGTTCTTATCCAGTTCGGTGCTTTCATTGTTCTTTGCGGAGCATCTCACTTCGCAAGCCTGTGGACATTCTTCATGCACTCGAAAGGTATTGCTGTCGTGATGGCGATAGCTAAAGCCTTGTGTGCTATCATATCCTGCGCTACTGCACTAATGCTTGTTCACATCATCCCTGATCTGATGAGCGTCAAAACTCGTGAACGTTTTCTCAAGAACAAGGCCGAAGAGCTTGACAGAGAAATGGGGCTTATTCTTACTCAAGAAGAAACTGGGAGGCATGTCAGAATGTTGACTCATGAGATTAGAAGCACACTTGATAGGCAAACCATTCTCAAGACTACTCTTGTTGAGCTGGGTAGAACTTTGGGCTTGGAGGACTGTGCACTGTGGATGCCTTCAAGATGTGGTCTACATCTTCAACTTTCACACACATTAAGCGGTGCACAAGTTAGCTCCTGCGTCCCAACAAACCTTCCTGCTGTTAATCAAGTTTTTAATAGTCCTCAAGCAATGAGAATTCCACATACCTGTCCCCTGATCACTATTAAACCTCTTGTTGAAAGACACATGCCACCTGAGGTGGTTGCTGTGAGAGTGCCTCTCTTGCATCTCTCAGATTTTCCAATTAATAATTGGCCAGATCTTTCTGCAAAGAGATATGCAATCATGGTTCTGATCCTCCCTGCTGACAGTGGTAGGAAATGGCGAGATTATGAATTGGAACTTGTTGATGTAGTGGCAGACCAGGTGGCGGTAGCTCTTTCACATGCTGCTATATTGGAGGAGTCAATGAAGGCCCGGGATCAACTGATGGAACAGAATGTTCATTTAGATTTGGCACGACGAGAAGCAGAGGTGGCGGTCCATGCTCGCAGTGATTTCCTTGCTGTCATGAATCATGAGATGAGGACACCAGCGCACGCTATTATGGCATTGTCCTCACTTCTCTTGGAGACTGAACTGACTCCAGAGCAGAGGATCGTGATAGAGGCAACATTGAAGAATAGCAACGTGTTGGCAGCACTTATTAGCGATGTTATAGATCTTTCTAGACTAGAAGATGGCAGCCTTCAATTAGAATTGGGAAAATTCAACCTTCACAGGGTTCTGGCGGAGGTTCTTGACTTGATAAAACCTATAGCATCTGTGAAGAAGCTACTTGTGACTTTAACTCTGGACCCCGATCTGCCTATCTTTGCCATTGGAGATGAGAAACGTCTAACGCAAACTCTCTTAAACGTTGTGGGTAATGCTGTGAAATTCACTAGGGAGGGTTATGTTTCTGTGAGAGCATCTGTTGCAAAAGCAAAAGTTTTACAGGATTGGCGACCTCCAGAAATTTGTACAGCGTCGAGTGATGGTCATCACTGCATTACAATACAGGTTAAAGATTCTGGATGCGGCATTGCCCCACAAGATATTGCTCATATTTTTACCAAATTTGCTGAGTCTCAGAGAGGACCGGCTCGAACTAGCGGTGGTGCGGGGCTCGGACTAGCTATTTGCAAAAGATTCGTACAACTCATGGAAGGTGACATGTGGGTTGAGAGTGAAGGCATAGGGAAAGGGACGACAAATACATTCACAGTGAAGCTAGGGATTTGCGGGAATCCGGATGCATCAGAACACCCCACCGGCTATAAAACCTTTGTCAAACATGATGAGCTCCCTCTTCCCAATCGACGCTATCAAACAAATCTTCAAAACGAAGGATAG 1875 0.4517 MESCDCVEPQYWPLDELLKKCQYMSDILIALAYFSIPLELIYFVQKSAFFPYRWVLIQFGAFIVLCGASHFASLWTFFMHSKGIAVVMAIAKALCAIISCATALMLVHIIPDLMSVKTRERFLKNKAEELDREMGLILTQEETGRHVRMLTHEIRSTLDRQTILKTTLVELGRTLGLEDCALWMPSRCGLHLQLSHTLSGAQVSSCVPTNLPAVNQVFNSPQAMRIPHTCPLITIKPLVERHMPPEVVAVRVPLLHLSDFPINNWPDLSAKRYAIMVLILPADSGRKWRDYELELVDVVADQVAVALSHAAILEESMKARDQLMEQNVHLDLARREAEVAVHARSDFLAVMNHEMRTPAHAIMALSSLLLETELTPEQRIVIEATLKNSNVLAALISDVIDLSRLEDGSLQLELGKFNLHRVLAEVLDLIKPIASVKKLLVTLTLDPDLPIFAIGDEKRLTQTLLNVVGNAVKFTREGYVSVRASVAKAKVLQDWRPPEICTASSDGHHCITIQVKDSGCGIAPQDIAHIFTKFAESQRGPARTSGGAGLGLAICKRFVQLMEGDMWVESEGIGKGTTNTFTVKLGICGNPDASEHPTGYKTFVKHDELPLPNRRYQTNLQNEG 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4076 624 Coils Coil 113 133 - -
Prci1g4076 624 SUPERFAMILY GAF domain-like 159 318 - -
Prci1g4076 624 FunFam Ethylene receptor 1 408 590 - -
Prci1g4076 624 Gene3D - 408 589 IPR036890 -
Prci1g4076 624 SMART gaf_1 159 317 IPR003018 GO:0005515
Prci1g4076 624 PRINTS Bacterial sensor protein C-terminal signature 511 525 IPR004358 GO:0016310|GO:0016772
Prci1g4076 624 PRINTS Bacterial sensor protein C-terminal signature 546 564 IPR004358 GO:0016310|GO:0016772
Prci1g4076 624 PRINTS Bacterial sensor protein C-terminal signature 529 539 IPR004358 GO:0016310|GO:0016772
Prci1g4076 624 Gene3D - 309 407 - -
Prci1g4076 624 Pfam His Kinase A (phospho-acceptor) domain 343 408 IPR003661 GO:0000155|GO:0007165
Prci1g4076 624 FunFam Ethylene response sensor 137 308 - -
Prci1g4076 624 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 330 409 IPR036097 GO:0000155|GO:0007165
Prci1g4076 624 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 585 IPR003594 -
Prci1g4076 624 CDD HisKA 343 404 IPR003661 GO:0000155|GO:0007165
Prci1g4076 624 ProSiteProfiles Histidine kinase domain profile. 350 587 IPR005467 -
Prci1g4076 624 SMART HKATPase_4 455 587 IPR003594 -
Prci1g4076 624 SMART HisKA_10 343 408 IPR003661 GO:0000155|GO:0007165
Prci1g4076 624 CDD HATPase_EvgS-ArcB-TorS-like 460 585 - -
Prci1g4076 624 Pfam GAF domain 159 307 IPR003018 GO:0005515
Prci1g4076 624 Gene3D - 139 308 IPR029016 -
Prci1g4076 624 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 398 585 IPR036890 -
Prci1g4076 624 FunFam Ethylene receptor 1 310 406 - -
Prci1g4076 624 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4076 Prci-Chr1 55820733 55824150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4076 1 596 Miscellaneous Gene Families AT1G66340 68.174 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4076 K14509 - gmx:100794417 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4076 1 55820733 55824150 Prci1g4076 1 55820733 55824150 ECH