Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4072 ATGTCTCAGCGCAAGCTTAGTCGAGTTCCCAGTATCAGAGACCGAGTAGAGGATACTCTCTCTGCGCATCGCAACGAACTTGTCGCTCTCCTCTCCAGGTATGTGGCTCAGGGAAAACGGATTTTGCAACCCCATAATTTGATTGATGAGCTCGAAAGCATCCTCGGCGAGGATGAAGCATCACAGGATCTTAAAAATGGTCCCTTCGGCGAAATCCTCAAGTCCGCACAGGAAGCCATAGTTTTCCCTCCTTTTGTGGCAATTGCAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTTTATGAACTCAGTGTGGAGCAATTGAGTATCCCTGAATATCTTCACTTCAAAGAGGAACTTGTAGATGGAACGACTCATGGCACTTTTGTATTGGAGCTTGATTTTGAACCATTCAATGCTTCATTTCCTCGTCCATCTCGATCATCGTCCATTGGCAATGGTGTTCAATTTCTCAACCGTCACCTTTCGTCAATTATGTTTCGGAACAAGGATTCTTTGGAGCCATTACTTGATTTCCTCAGACTTCACACATACAAAGGGCATACACTGATGTTAAATGATCGTATCCAGAGCATCTCCAAACTACAGTCAGCTTTGGTCAAGGCTGAGGATTATCTCTCTAAGCTTAAACCTGATGCAGGCTATTCTGAGTTTGAATATGTATTACAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACTGCTGAAAGGGTGATGGAGATGATGCATCTTCTCTCTGACATTCTACAGGCTCCTGATCCTTCTACATTAGAGACTTTTCTTGGAAGAGTTCCTATGGTGTTTAATGTTGTTATATTATCTCCTCATGGCTACTTTGGTCAAGCCAATGTCTTGGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATATTGGATCAAGTGCGTGCCCTTGAGAACGAGATGCTTCTTAGAATCCAGAAGCAAGGACTAGATTTCACTCCAAGAATTCTAATTGTTACCAGGTTGATACCTGATGCAAAGGGGACAACCTGCAATCAGCGGCTAGAAAGAGTTAGTGGTACTGAACACACTCATATCTTGCGAGTTCCTTTCAGATCACATACAGGAATTCTTCGTAAATGGATCTCAAGGTTTGATGTGTGGCCTTATCTGGAGACTTATGCAGAGGATGTTGCTAGTGAAATTGCTGCTGAGTTACAGGGTTATCCTGATTTCATTATTGGAAATTACAGTGATGGAAACCTTGTTGCGACTTTATTAGCTTCTAAGATGGGAGTGACACAGTGCACAATTGCGCATGCACTAGAGAAAACAAAATATCCAGATTCAGATATATATTGGAAAAAATTTGAGGAGAAGTATCATTTTTCATGCCAATTCACTGCTGACCTAATAGCAATGAACAATGCTGACTTTATCATCACTAGTACATATCAAGAGATTGCAGGAACGAAGAATACTGTTGGCCAATATGAGAGCCACAGTGCATTTACTCTTCCTGGGCTCTACAGGGTTGTTCATGGCATTGATGTTTTTGATCCTAAGTTCAATATTGTCTCTCCTGGGGCAGATATGAGCATCTACTTTCCCTACTCTGAAAAGCAGAAAAGATTGACTGCCCTGCATGGTTCAATTGAACAGCTGTTATATGATCCTGAGCAGACTGATGAGCACATTGGTACACTTAAAGATCGGTCAAAGCCCATAATATTTTCCATGGCAAGGTTAGACCGAGTGAAAAACATTTCTGGCTTGGTAGAAAGCTATGGTAAGAACAGCAAATTGAGGGAACTGGTCAACCTGGTTGTGGTGGCTGGCTATATTGATGTAAAGAAGTCCAGGGACAGAGAAGAAATTACAGAAATTGAGAAGATGCATGATCTCATGAAGAAATATAATTTAGATGGTGATTTTCGTTGGATAGCTGCCCAAACAAACAGGGCACGTAATGGTGAGCTTTATCGCTATATAGCAGACACCAGAGGTGCCTTCGTTCAGCCTGCTTTCTATGAAGCTTTTGGACTGACAGTTGTGGAGGCCATGACTTGTGGGCTGCCCACGTTTGCTACTTGCCATGGTGGTCCTGCTGAGATAATTGAGCATGGCGTATCGGGATTTCACATTGATCCTTATCACCCTGACCAAGCTTCTGAAGTATTGGTTGATTTCTTCCAACGGTGCAAGGAGGACCCAGGCCATTGGAATAAAATATCTGATGGTGGTCTTCAAAGAATTTATGAGAGGTACACATGGAAGATATATTCCGAGAGGCTCATGACCTTGGCGGGAGTTTATAGTTTCTGGAAGCACGTGTCCAAACTTGAGAGGCGTGAAACTCGACGATATCTTGAGATGTTCTACATCCTTAAGTTCCGTGATTTGGCAAATTCTTTTCCTCCAGCAAAGGACGATGCAAATTAA 2436 0.4282 MSQRKLSRVPSIRDRVEDTLSAHRNELVALLSRYVAQGKRILQPHNLIDELESILGEDEASQDLKNGPFGEILKSAQEAIVFPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSIPEYLHFKEELVDGTTHGTFVLELDFEPFNASFPRPSRSSSIGNGVQFLNRHLSSIMFRNKDSLEPLLDFLRLHTYKGHTLMLNDRIQSISKLQSALVKAEDYLSKLKPDAGYSEFEYVLQGMGFERGWGDTAERVMEMMHLLSDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSHTGILRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVATLLASKMGVTQCTIAHALEKTKYPDSDIYWKKFEEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHSAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSEKQKRLTALHGSIEQLLYDPEQTDEHIGTLKDRSKPIIFSMARLDRVKNISGLVESYGKNSKLRELVNLVVVAGYIDVKKSRDREEITEIEKMHDLMKKYNLDGDFRWIAAQTNRARNGELYRYIADTRGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQASEVLVDFFQRCKEDPGHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKHVSKLERRETRRYLEMFYILKFRDLANSFPPAKDDAN 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4072 811 Gene3D - 11 147 - -
Prci1g4072 811 Pfam Sucrose synthase 8 555 IPR000368 GO:0005985|GO:0016157
Prci1g4072 811 Coils Coil 13 33 - -
Prci1g4072 811 Gene3D Glycogen Phosphorylase B; 529 756 - -
Prci1g4072 811 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 297 765 - -
Prci1g4072 811 Gene3D - 148 277 - -
Prci1g4072 811 NCBIfam sucrose synthase 24 804 IPR012820 GO:0005985|GO:0016157
Prci1g4072 811 Pfam Glycosyl transferases group 1 561 729 IPR001296 GO:0016757
Prci1g4072 811 FunFam Sucrose synthase 282 563 - -
Prci1g4072 811 PANTHER - 7 807 IPR012820 GO:0005985|GO:0016157
Prci1g4072 811 CDD GT4_sucrose_synthase 280 765 - -
Prci1g4072 811 Gene3D Glycogen Phosphorylase B; 282 799 - -
Prci1g4072 811 FunFam Sucrose synthase 148 277 - -
Prci1g4072 811 FunFam Sucrose synthase 11 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4072 Prci-Chr1 55776456 55782504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4072 1 809 Glycosyltransferase AT4G02280 84.302 0.0 1451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4072 K00695 - gmx:100802045 1483.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4072 1 55776456 55782504 Prci1g4072 1 55776456 55782504 ECH