Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4045 ATGGCCTCCGAACTCATTTTCAGAGGCCACGAGTCCCAGCCCGTCCACGATTCCTACTCCCCCAAGCCCCTCAAGCCTTGGCTCTCCCTCACCCGCCCCATCCGCTATCTCCTCCTCGAGCAGCGCCTCCTCTTCGTCCTCCTCGGCATTGCCATCGCCTCCCTCTTCTTCATCTTCTTCCCCTCCTCCCGCATCCCTCCCCGCCCCGACTCTCTCCCCGTCCCTTACTTCCAGTACGACTCCGCCCCTTTGTTCCATGAGCCCAGGATCGACCGCTCTCTCCCCCACAGGATGCCTGTTCATTCCTTCGGCAAGGTCCCCTTGGGGATTAAGAGAAAGGGACTCCGCATCGTTGTCACCGGCGGCGCGGGTTTTGTCGGTTCCCACCTCGTGGATCGTCTGATTGCCAGGGGCGACAGCGTCATCGTCGTCGATAATTTCTTCACCGGAAGGAAGGAGAACGTGATGCACCACTTCGGGAACCCCAGATTCGAGCTCATTCGGCACGACGTCGTCGAGCCCCTCTTGCTGGAGGTGGATCAGATCTATCATCTTGCATGCCCTGCATCCCCCGTTCATTACAAGTTCAACCCGGTCAAGACTATCAAGACCAATGTGGTGGGAACCTTGAACATGCTGGGGCTGGCTAAAAGAGTCGGCGCAAGGTTTTTGCTCACCAGTACCAGCGAGGTTTACGGCGATCCTCTTCAACACCCTCAGAAGGAGACTTACTGGGGCAACGTCAATCCTATTGGTGTCCGAAGTTGCTACGACGAGGGAAAGCGTACGGCCGAGACGTTGACAATGGATTACCACAGAGGAGCAGGCGTTGAGGTTAGAATTGCTAGAATCTTTAACACCTATGGTCCCCGAATGTGCCTGGACGATGGTCGCGTTGTCAGCAACTTCGTTGCTCAGGCGTTAAGAAAGGAGCCTTTGACTGTATATGGGGATGGAAAGCAGACAAGGAGTTTTCAGTATGTTTCTGATTTGGTCGAGGGTCTGATGCGCCTTATGGAGGGAGAGCATGTGGGGCCTTTCAACCTCGGAAATCCTGGTGAATTCACCATGCTCGAACTTGCCAAGGTGGTGCAAGAAACGATAGACCCCGATGCGAAGATAGAGTACAGACCCAACACAGAGGATGATCCACACAAGAGGAAGCCTGATATTTCAAGGGCCAAGGAACTATTAGGGTGGGAGCCCAAGGTGGACCTGCGCAAGGGACTGCCTTTAATGGTTTCTGACTTCCGACAACGTATTTTTGGTGACCACAAGGAAGGTGCAACCTCCACCTAA 1299 0.5481 MASELIFRGHESQPVHDSYSPKPLKPWLSLTRPIRYLLLEQRLLFVLLGIAIASLFFIFFPSSRIPPRPDSLPVPYFQYDSAPLFHEPRIDRSLPHRMPVHSFGKVPLGIKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPDAKIEYRPNTEDDPHKRKPDISRAKELLGWEPKVDLRKGLPLMVSDFRQRIFGDHKEGATST 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4045 432 MobiDBLite consensus disorder prediction 1 21 - -
Prci1g4045 432 FunFam UDP-glucuronic acid decarboxylase 2 111 236 - -
Prci1g4045 432 MobiDBLite consensus disorder prediction 372 394 - -
Prci1g4045 432 FunFam UDP-glucuronic acid decarboxylase 1 237 422 - -
Prci1g4045 432 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 25 425 IPR044516 GO:0042732|GO:0048040|GO:0070403
Prci1g4045 432 Pfam GDP-mannose 4,6 dehydratase 119 411 IPR016040 -
Prci1g4045 432 CDD UGD_SDR_e 116 418 - -
Prci1g4045 432 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 422 IPR036291 -
Prci1g4045 432 Gene3D - 238 422 - -
Prci1g4045 432 Gene3D - 111 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4045 Prci-Chr1 55604303 55607634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4045 55 429 Miscellaneous Gene Families AT1G02000 25.799 2.37e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4045 K08678 - gmx:100783463 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4045 1 55604303 55607634 Prci1g4045 1 55604303 55607634 ECH