Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4022 ATGAAGAGAAAGGCTTGTGCTGAAGTAGGAATCAAGTCCTTTGATGTGGATCTTCCTGAGCAAGTATCCGAGGCTGATCTAGTCAAACAAGTCCATGAGTTAAACGTCAATCCTGATATACATGGTATATTGGTTCAACTTCCATTACCAAGACATATAAATGAAGAGAAAGTTTTGACTGAAATCAGCCTTGAGAAGGATGTAGATGGCTTTCATCCTTTGAACATTGGCAAACTTTCCATGAAAGGCAGAGAACCACTATTTGTCCCTTGCACTCCCAAGGGATGTCTTGAACTTCTCCACCGAAGTGGTGTGAGTATAAAGGGCAAGAAGGCAGTTGTGGTTGGTCGAAGTAACATAGTTGGATTGCCAGTTTCAATGCTTCTTCTTAAAGAAGATGCTACAGTTACCATTGTTCATTCACGCACAAGTGAACCAGAAAGAATCATCCGCGAAGCAGATATTGTAATTGCAGCTGCTGGACAACCAATGATGGTCAAGGGCAGTTGGATCAAACCTGGAGCTGCAGTCATAGATGTTGGCACAAATGCTGTTGATGACCCAACTAAGAAGTCAGGTTATCGGCTTGTCGGAGATGTAGATTTTGAGGAAGCATCTAAAGTAGCTGGATGGATTACTCCTGTTCCTGGTGGTGTGGGTCCAATGACAGTCACAATGTTGCTCCAAAATACCTTGGAGGGAGCCAAACGCAAACTTGAGCAGAGTAATTGA 732 0.4317 MKRKACAEVGIKSFDVDLPEQVSEADLVKQVHELNVNPDIHGILVQLPLPRHINEEKVLTEISLEKDVDGFHPLNIGKLSMKGREPLFVPCTPKGCLELLHRSGVSIKGKKAVVVGRSNIVGLPVSMLLLKEDATVTIVHSRTSEPERIIREADIVIAAAGQPMMVKGSWIKPGAAVIDVGTNAVDDPTKKSGYRLVGDVDFEEASKVAGWITPVPGGVGPMTVTMLLQNTLEGAKRKLEQSN 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4022 243 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 1 70 IPR046346 -
Prci1g4022 243 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 1 69 IPR020630 GO:0004488
Prci1g4022 243 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 24 49 IPR020867 GO:0003824
Prci1g4022 243 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 1 237 - -
Prci1g4022 243 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 105 125 IPR000672 GO:0004488
Prci1g4022 243 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 183 IPR000672 GO:0004488
Prci1g4022 243 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 23 50 IPR000672 GO:0004488
Prci1g4022 243 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 212 230 IPR000672 GO:0004488
Prci1g4022 243 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 58 79 IPR000672 GO:0004488
Prci1g4022 243 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 195 211 IPR000672 GO:0004488
Prci1g4022 243 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 71 237 IPR036291 -
Prci1g4022 243 Gene3D Leucine Dehydrogenase, chain A, domain 1 1 233 - -
Prci1g4022 243 Hamap Bifunctional protein FolD [folD]. 1 239 IPR000672 GO:0004488
Prci1g4022 243 FunFam C-1-tetrahydrofolate synthase, cytoplasmic, putative 1 93 - -
Prci1g4022 243 Gene3D - 90 215 - -
Prci1g4022 243 CDD NAD_bind_m-THF_DH_Cyclohyd 65 236 IPR020631 GO:0004488
Prci1g4022 243 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 72 238 IPR020631 GO:0004488
Prci1g4022 243 FunFam Bifunctional protein FolD 88 215 - -
Prci1g4022 243 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 216 224 IPR020867 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4022 Prci-Chr1 55472993 55476263 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4022 - - gmx:100792682 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4022 1 55472993 55476263 Prci1g4022 1 55472993 55476263 ECH