Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3778 ATGGTCCTAGGCTTGAGAGGAAAGAATAGGAGAAGTGCCACTGTTCAAATTGATTACCTCGTTCATATACAGGAGATTAAACCTTGGCCCCCTACTCAATCCCTCAGATCCCTTCGTTCTGTATTAATGCAATGGGGAAATGGCGAATGCAGTTCAGGTTCTACCAATCTTGTTGTCCCCTCTCTTGGTTCTGTTATCGGTGAAGGAAAAATTCAATTTAACGAGTCATTTAAACTTCATGCAACTTTGTTGAGGGATATGTCTGTTAGAGGCGGTGATGCTGATGTATTTCAAAAGAATTGTTTGGAGTTCAACTTGTATGAGCCTCGAAGAGATAAGGCTGTTAAAGGCCAGTTATTGGGAACGGCTATCATAGATTTGGCAGATTATGGTATGCTCAAAGAGGCGTTGAGCATTAGTGCTCCATTGAACTGCAAGAGAAACTACAGAAACACAGATCAGCCACTTTTGTTCATTAAAATTCAGCCTGTTCAAAAGGATCACAATAGCTCGTCTTCAAAGGACAGGTTGTCAAAAGCTATGTCAAAGGGAAGTGGTGTTGGTGACTCTGTTTCGGAATTGATGAATGAAGAATACACTGAGGAAGCTGAGATTGCCTCTTTTACTGATGACGATATTTCCTCACATTCATCTGTGGCTGCAGTTACTTCCGTCCTTGAGTCCATTGGAAATAGAACTCCTGAACTTCAAGAGAATGGATCTACTCAAAACACAGATGGGAATGATAAAGAGCATGCGCTGGATTCAGAAAAAAGGATTGAAAAATTGAATATAATACCGCAAGATACATATAAGAAGCTGGAGAGGAGTTCGCCATACACATCATCAGTAGATGTATCATCTGATCTTGGGAGTCCACTAAATGGTCAAACTTCTATTAGTTCTCATCATAGTTCAGTGACATCCCAAAAGCATGTTGTCTCATCAATCGTTCATCGTTCTTCCCCATCTTTAGCACTTGACAACTTAAATGAAAATCCTAGGACCAAGACTGGCAGCAGTTACTACGAGCATTTGAATCAGCATGTTCAAATAAACGCTGATACAAGTAGAACTATAACTACTGATGCTCAATTAAACCGCAATGAATGCACTTCTCATGGTTATCCTTGCAACACAGCATCTCCAGATAATAATCACTATGTGGGAACGAATCCTGGCACTGCAAACAAGGATGGTTCTGAAATCAACGACAAACTTTATAAGGGATGTGAGGAAGCTGAAAATTATCACGTGGAAAGCATAAGTGATAAATTTTACTGTAGTTCTGTTAATGATAAACATGCAAATGAAATTTCTAATTTGTATAAGCTCTGCCATGTGACAGATGAAAATTCTGGAACTGAAGGTGTCAAAGATCAAAACCCATTGAGTACAAGTGCATATACTTTAGATGGGACAAATATTGTTTTGAAAGACAATAGTCTGAAAAGTGAAAGATTAAAGCACGTAAAGTCTGTAAGGTCACCTACAGACTCAACATTGAGTACTGGATCACCTGGCAGTAATCATCATGATGAAGTAAAGGATGCTGGCATGGTTGGAGATGTGCAAAATAATGGAGGGAATATCAGAGTCAGTGACAAAAAAGATGCCAAGGTTTATCCAAAGGAAGTAAGGAGTTCAATTTCAGACCGCAAAATCAATCTTTTGGAAAGCAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCAACTATAGAGGTTGCTCTATATTCTGTAGTTGCTGAGCACGGAAGCTCCATGAGTAAGATATATGCCCCAGCTCGGCGCCTTTCTAGGCTCTATCTTCATGCTTGTAAAGAAAATCTTCGATCAAGAAGGGCTGGAGCTGCTAAAAGTGCTGTTTCTGGACTAGTACTTGTTGCAAAAGCGTGTGGAAATGATGTCCCAAGGTTGACATTTTGGTTGTCTAATTCTATCGTGTTAAGAACAATTATATGCCAAACCACCAAAAATGTAATGCCTTCTGTTACTGCTGGACCTAGCGTAAAAAGGAGAATTGGGGGAGAGGGGAATGACAAGATAACTCCCTCACTGCGATGGAAGGGATCCTCTCCCAGAAACAATGAAAACACCACTGTTGAGCAAGAAGGTTTTGGTAATTGGGATGACCCCCTTGTATACATATCAGCACTGGAAAAGGTAGAAGCTTGGATCTTCTCTCGCATTGTGGAATCTATATGGTGGCTGACTATGACTCCACACATGCATCAAGTTGATGCGAAGGTCACCGAAAAAGGTGTGGGCTCTTCCTCATGGAAAACCTTTGGAAGGATGTCTAGCTCATGTGATCATGAACAGGGGAAGTTTTCACAAGATATTTGGAAGAATGCCTTTAAGGAAGCCTATGAAAAGCTCTGTCCTATTCGTGCTGGAGGGCATGAGTGTGGTTGTTTGCCAGTGCTGTCTAGATTGATAATGGAGCAATGCGTGGCAAGATTAGATGTGGCTATGTTCAATGCTATTCTTCGTGAATCTGCTGATGAAATCCCAACTGATCCTGTATCCGATCCAATCAGTGATCCTAAGGTTCTTCCTATTCTCCCTGGAAAATCAAGCTTCGGAGCTGGTGTGCAGCTAAAAACTGCGATTGGGAACTGGTCTAGATGGCTTACTGACCTATTTGGCATTGATGATGATGACTCGCTTCAAGACAACGATGACCCTGACTTAGCTAATAATGATGGGAGCCAGAATGCATCTTGCAAGTCCTTCCATCTTCTTAATGCACTAAGTGAACTCTTGATGCTTCCTAAGGATATGCTGCTGGGTGCATCCGTCAGGAAAGAGGTATGCCCTATGTTTAGCGCACCAGTAATCAAGAGGATTTTAAACAATTTTGCCTCAGATGAGTTCTGCCCTGATCCAATTCCAACTGCTATTTTTGAAGCTCTAGATTCAGAGGATGATCTCGAGGATGATGGAGTGCGTGTCAAAAACCTCCCATGCATTGCGACCCCCACAGTCTATATAACTCCCGCTGTATCTTCCATAGCAAACATAATTGGGGAGGTCGGAAGCGAACCTAAACTGAGAAGTAGATCTTCCGTTCTAAGGAAGGCATACGCCAGCGATGATGAGCTCGATGAATTAAACTCTCCCGTGTCTTTGATATCTAACGATGGTTTCATGTCCAAAGCACATTCTACAAAACCCACTTGGAAGTCGAAAGAAATTCAAAATTCATTTGCTGTCAGATATAAACTCCTTACGGATGTATGGGCGAACAGCGAATAG 3264 0.4151 MVLGLRGKNRRSATVQIDYLVHIQEIKPWPPTQSLRSLRSVLMQWGNGECSSGSTNLVVPSLGSVIGEGKIQFNESFKLHATLLRDMSVRGGDADVFQKNCLEFNLYEPRRDKAVKGQLLGTAIIDLADYGMLKEALSISAPLNCKRNYRNTDQPLLFIKIQPVQKDHNSSSSKDRLSKAMSKGSGVGDSVSELMNEEYTEEAEIASFTDDDISSHSSVAAVTSVLESIGNRTPELQENGSTQNTDGNDKEHALDSEKRIEKLNIIPQDTYKKLERSSPYTSSVDVSSDLGSPLNGQTSISSHHSSVTSQKHVVSSIVHRSSPSLALDNLNENPRTKTGSSYYEHLNQHVQINADTSRTITTDAQLNRNECTSHGYPCNTASPDNNHYVGTNPGTANKDGSEINDKLYKGCEEAENYHVESISDKFYCSSVNDKHANEISNLYKLCHVTDENSGTEGVKDQNPLSTSAYTLDGTNIVLKDNSLKSERLKHVKSVRSPTDSTLSTGSPGSNHHDEVKDAGMVGDVQNNGGNIRVSDKKDAKVYPKEVRSSISDRKINLLESKIKMLEGELREAATIEVALYSVVAEHGSSMSKIYAPARRLSRLYLHACKENLRSRRAGAAKSAVSGLVLVAKACGNDVPRLTFWLSNSIVLRTIICQTTKNVMPSVTAGPSVKRRIGGEGNDKITPSLRWKGSSPRNNENTTVEQEGFGNWDDPLVYISALEKVEAWIFSRIVESIWWLTMTPHMHQVDAKVTEKGVGSSSWKTFGRMSSSCDHEQGKFSQDIWKNAFKEAYEKLCPIRAGGHECGCLPVLSRLIMEQCVARLDVAMFNAILRESADEIPTDPVSDPISDPKVLPILPGKSSFGAGVQLKTAIGNWSRWLTDLFGIDDDDSLQDNDDPDLANNDGSQNASCKSFHLLNALSELLMLPKDMLLGASVRKEVCPMFSAPVIKRILNNFASDEFCPDPIPTAIFEALDSEDDLEDDGVRVKNLPCIATPTVYITPAVSSIANIIGEVGSEPKLRSRSSVLRKAYASDDELDELNSPVSLISNDGFMSKAHSTKPTWKSKEIQNSFAVRYKLLTDVWANSE 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3778 1087 MobiDBLite consensus disorder prediction 489 538 - -
Prci1g3778 1087 MobiDBLite consensus disorder prediction 495 509 - -
Prci1g3778 1087 MobiDBLite consensus disorder prediction 683 705 - -
Prci1g3778 1087 MobiDBLite consensus disorder prediction 377 399 - -
Prci1g3778 1087 MobiDBLite consensus disorder prediction 231 261 - -
Prci1g3778 1087 MobiDBLite consensus disorder prediction 377 401 - -
Prci1g3778 1087 MobiDBLite consensus disorder prediction 274 316 - -
Prci1g3778 1087 MobiDBLite consensus disorder prediction 167 190 - -
Prci1g3778 1087 MobiDBLite consensus disorder prediction 231 247 - -
Prci1g3778 1087 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 540 1085 IPR021827 GO:0005643
Prci1g3778 1087 MobiDBLite consensus disorder prediction 687 705 - -
Prci1g3778 1087 Coils Coil 555 575 - -
Prci1g3778 1087 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3778 Prci-Chr1 53969170 53976396 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3778 - - gmx:100783487 1271.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3778 1 53969170 53976396 Prci3g2100 3 35148478 35154878 CCT
Prci1g3778 1 53969170 53976396 Prci1g3778 1 53969170 53976396 ECH