Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3722 ATGCCGGACGAAGACTTAGTGGAGCTTAAGTTTCGTATCTTTGATGGTTCAGACATTGGGCCCTTCCGTTACCCGCCAGCTTCTACCGTGGCCATGCTGAAGGAAAGAATTGTTGCAGAATGGCCAAAAGGCAAGAAGACTATACCGAAGGCAGCTAATGACATAAAACTTATAAATGCTGGAAAAATTTTGGAAAACAACAAGACAGTTGGTCAATGTAGAGCACCTTTTGGTGAGCTTACTAGTGAAATCACCATGCATGTTGTCGTCCAGCCATCTTTGGCAAGATCAAAAGCAGAGAAAGATGTTGATGAGCTCCCAATAAAACCCATATGTGCGTGTGCAATATTGTGA 354 0.4322 MPDEDLVELKFRIFDGSDIGPFRYPPASTVAMLKERIVAEWPKGKKTIPKAANDIKLINAGKILENNKTVGQCRAPFGELTSEITMHVVVQPSLARSKAEKDVDELPIKPICACAIL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3722 117 ProSiteProfiles Ubiquitin domain profile. 7 73 IPR000626 GO:0005515
Prci1g3722 117 PIRSF MUB 1 117 IPR017000 -
Prci1g3722 117 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 114 IPR039540 -
Prci1g3722 117 SUPERFAMILY Ubiquitin-like 3 95 IPR029071 -
Prci1g3722 117 Gene3D - 1 99 - -
Prci1g3722 117 CDD Ubl_MUBs_plant 6 92 - -
Prci1g3722 117 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 116 IPR040015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3722 Prci-Chr1 53582036 53587138 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3722 - - aew:130755098 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3722 1 53582036 53587138 Prci1g3722 1 53582036 53587138 ECH