Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3694 ATGATGAATTACTTTCCGGAGGAGGTATTAGAGCACGTGTTCGACTTCGTGACGTCCCATCGCGACCGGAATGCGGTGTCTCTGGTGTGCAAAACGTGGTACAGAATAGAAAGATGTAGCCGGCAAAAGGTCTTCATAGGGAACTGTTACTCGATCAGCCCGGAGAGGTTGATCCAGAGGTTTCCTAGACTAAAATCTCTGACTCTGAAGGGGAAGCCTCATTTTGCGGACTTCAATCTAGTTCCTGATGATTGGGGAGGCTTTGTCTTCCCTTGGATTGAAGCACTGGCGAAGAACCGGGTGGGATTGGAGGAGCTTAGGTTGAAGAGAATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCCCGTTCCTTCTCGAATTTCAAGTCTTTAGTTCTTGTGAGCTGTGAAGGGTTCACCGCCGATGGCCTGGCAGCAATAGCTGCAAATTGCAAGTTTCTTACAGAGCTGGACCTGCAAGAATATGAAATTGAGGATCACAAAGGGCAATGGCTAAGCTGCTTTCCTGACACTTGTACATCACTGGTCTCTCTCAATTTTACTTGTCTCAAAGGAGAGATCAATTCGGGAGCTCTTGAAAGGCTTGTGGCCAGATCTCCTAACCTTAGGAGTTTGAGGTTAAATCCTTCTGTGCCCCTTGACACACTCCAAAGGATATTGATGCGAGCACCTCAGCTGGTTGACCTGGGTACTGGGTCTTTTGTTGATGATCCAGATTCTGGGACGTATGCGGAGCTTAAAAGTACCATTTTAAAGTGTAAATCAATAACCAGCTTGTCGGGGTTTTTGGAGGTTGCTCCTCGCTGCCTGCCTGCTATATATCCTATTTGCTCGAACTTGACATCCTTGAATCTGAGCTATGCAGCAGGGATTGAGGGTAAAGAGCTGAGAAAACTAATTCACCACTGTGGGAAACTTCAGCGATTATGGATACTGGATTGGATTGGAGACGAAGGACTAGGCGTTGTAGCTGTTACTTGCAAAGATTTGCAAGAATTGAGGGTTTTCCCATGTGATGAATGGGATGGATCTGTAACGGAAAATGGACTTGTTGCTATATCAATGGGTTGCCCCAAGCTTCACTCACTGCTTTACTTCTGCCAACGGATGACTAATGCTGCCCTCATAACAGTGGCCAAGAACTGCCCAAATTTTATCCGCTTTAGGCTGTGCATCCTGGATCCCGCAAAACCTGACCCAGAAACATTGCAGCCACTAGATGAAGGTTTTGGGGCAATAGTACAGTCTTGCAGGCGTCTCAAGCGCTTTTCACTCTCCGGCTTGTTGACCGATAAAGTCTTCCTTTACATAGGGATGTATGCTGAGCAGCTGGAAATGCTGTCCATTGCATTTGCTGGAGAAAGTGACAAGGGGATGCTATACGTGCTGAATGGATGCAAGAAGCTCAGGAAGCTTGAGATAAGAGATTGCCCTTTCGGCAACACGGCACTTCTAAGGGACGTAGGTAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGCGAAGTCACCCTTGGGGCCTGCAAGGCACTGGCTCGGAAGATGCCAAGGCTTAATGTGGAGATCATAAATGAGGATGAACAGGAAGAGTGTAGCATGGATGGGCAGAGAGTAAAGAAGATGTACCTGTATCGAACTCTAGTAGGGAAGAGGAAAGATGCACCAGAATTTGTGTGGACTCTGTAG 1710 0.4731 MMNYFPEEVLEHVFDFVTSHRDRNAVSLVCKTWYRIERCSRQKVFIGNCYSISPERLIQRFPRLKSLTLKGKPHFADFNLVPDDWGGFVFPWIEALAKNRVGLEELRLKRMVVSDESLELLSRSFSNFKSLVLVSCEGFTADGLAAIAANCKFLTELDLQEYEIEDHKGQWLSCFPDTCTSLVSLNFTCLKGEINSGALERLVARSPNLRSLRLNPSVPLDTLQRILMRAPQLVDLGTGSFVDDPDSGTYAELKSTILKCKSITSLSGFLEVAPRCLPAIYPICSNLTSLNLSYAAGIEGKELRKLIHHCGKLQRLWILDWIGDEGLGVVAVTCKDLQELRVFPCDEWDGSVTENGLVAISMGCPKLHSLLYFCQRMTNAALITVAKNCPNFIRFRLCILDPAKPDPETLQPLDEGFGAIVQSCRRLKRFSLSGLLTDKVFLYIGMYAEQLEMLSIAFAGESDKGMLYVLNGCKKLRKLEIRDCPFGNTALLRDVGKYETMRSLWMSSCEVTLGACKALARKMPRLNVEIINEDEQEECSMDGQRVKKMYLYRTLVGKRKDAPEFVWTL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3694 569 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 82 529 - -
Prci1g3694 569 Pfam Transport inhibitor response 1 protein domain 62 108 IPR041101 -
Prci1g3694 569 FunFam Transport inhibitor response 1 42 569 - -
Prci1g3694 569 Pfam F-box 3 42 IPR041567 -
Prci1g3694 569 SMART LRR_CC_2 364 388 IPR006553 -
Prci1g3694 569 SMART LRR_CC_2 100 124 IPR006553 -
Prci1g3694 569 SMART LRR_CC_2 125 150 IPR006553 -
Prci1g3694 569 SMART LRR_CC_2 473 498 IPR006553 -
Prci1g3694 569 SMART LRR_CC_2 284 309 IPR006553 -
Prci1g3694 569 SUPERFAMILY RNI-like 17 529 - -
Prci1g3694 569 Gene3D - 1 41 - -
Prci1g3694 569 SMART fbox_2 5 44 IPR001810 GO:0005515
Prci1g3694 569 CDD F-box_AtTIR1-like 2 41 - -
Prci1g3694 569 Gene3D Ribonuclease Inhibitor 42 569 IPR032675 -
Prci1g3694 569 FunFam Transport inhibitor response 1 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3694 Prci-Chr1 53410271 53413590 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3694 - - gmx:100812516 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3694 1 53410271 53413590 Prci1g3694 1 53410271 53413590 ECH