Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3653 ATGAAGAACGATAAGGAATCCAGATCAAAATGCAGCAAGCCTGTAAAGAAACCACGACGGGTGACAATGGATGATGTTCTTTTGGCATCCCAGGAGACCAAGGAAGAGAGGGAGCAAAGGATCCGTAATCTATTCAGTTTCTTTGATGAGGAAGATTCTGGAATTATAGATTATGCCCAGATTGAAGCAGGCCTCTCTGCGCTCCATATACCACCAGAATACAAGCATGCCAAGGATTTCTTAAAAGCTTGTGATGCTGACAAAGACGGGCGGGTCAATTATAAGGACTTCAAGAAGTATGTGGATGACAAGGAGATGGAGCTTTACCGCATATTTCAAGCCATTGATGTTGAACACAACGGATGCATTATGCCAGAAGAGCTCTGTGAGGCAGTGGTAAGGGCAGGGATTCAGATTGGTGAGGAGGAACTTGCCATTTTTATGGAGCATGGGGTTATAACATTTGAAAAATGGAGGGATTTTCTTCTGCTATACCCAAGAGAGGCAACTATAGAAAACATTTACCGTTATTTAGAGCGTGTATGCCTTATTGACATTGGGGAACAAAGTGTTAGTCCTACAGGTATCAGTGGAAACATTCACGCAGGTAAATATTTGCTTGCCGGAGGATTGGCAGGGGCAGCATCGCGCACTGCTACTGCACCACTTGATCGTCTAAAGACCATTCTGCAAATCCAAACCACGCGGACTCATATAATGCCTGCACTTAAAAATATATGGAAAGAAGGCGGTTTCTTGGGGTTTTTTCGAGGCAATGGCTTGAATGTCCTCAAGGTGGCTCCTGAGAGTGCCATAAGGTTTTACACTTACGAGACACTCATCAAGACTTGGATTGTCAATTCTAAAGGAGATCAAGAGGGAGGCTCTGGTATTGGGACTGTGGGCCACGTACTAGCTGGTGGTTTGGCTGGTGGAATAGCACAAACTACAATATATCCAATGGACCTTATTAAAACACGAGTACAAACCTATGCTTTTAGTCAAGGTGGCAGAATCCCTCGTCTTGGAAACCTCTCTAAAGATATATGGGTTCACGAAGGACCTCGTGCATTCTATAGGGGCCTGGTTCCTTCTCTTCTTGGGATTATCCCTTATGCTGGCATAGATATAGCTGCATACGAGGCTCTGAAAGACATGTCCAAGAAGTATATTCTTCATGATGGAGGTGAACCTGGTCCTCTTGTACAACTGTGTTGTGGGACAGTTTCAGGAGCCCTTGGAGCAACATGCGTATACCCGTTGCAGGTCGTTAGAACCAGAATGCAGGCTCAACGCTCCAATGCTAGTGCTGCTTATAATGGAATGAATGAAGTGTTCAGGAGGACTTTTGAGCATGAAGGGTTTAGAGGATTCTACAAAGGGATATTTCCCAACCTCCTCAAAGTGATTCCATCGGCAAGTATCACTTATGTGCTTTATGAAGCTATGAAAAGGGGTTTGAAATTGGAGTGA 1473 0.444 MKNDKESRSKCSKPVKKPRRVTMDDVLLASQETKEEREQRIRNLFSFFDEEDSGIIDYAQIEAGLSALHIPPEYKHAKDFLKACDADKDGRVNYKDFKKYVDDKEMELYRIFQAIDVEHNGCIMPEELCEAVVRAGIQIGEEELAIFMEHGVITFEKWRDFLLLYPREATIENIYRYLERVCLIDIGEQSVSPTGISGNIHAGKYLLAGGLAGAASRTATAPLDRLKTILQIQTTRTHIMPALKNIWKEGGFLGFFRGNGLNVLKVAPESAIRFYTYETLIKTWIVNSKGDQEGGSGIGTVGHVLAGGLAGGIAQTTIYPMDLIKTRVQTYAFSQGGRIPRLGNLSKDIWVHEGPRAFYRGLVPSLLGIIPYAGIDIAAYEALKDMSKKYILHDGGEPGPLVQLCCGTVSGALGATCVYPLQVVRTRMQAQRSNASAAYNGMNEVFRRTFEHEGFRGFYKGIFPNLLKVIPSASITYVLYEAMKRGLKLE 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3653 490 Pfam Mitochondrial carrier protein 200 284 IPR018108 -
Prci1g3653 490 Pfam Mitochondrial carrier protein 399 488 IPR018108 -
Prci1g3653 490 Pfam Mitochondrial carrier protein 298 389 IPR018108 -
Prci1g3653 490 SUPERFAMILY EF-hand 32 166 IPR011992 -
Prci1g3653 490 SUPERFAMILY Mitochondrial carrier 201 482 IPR023395 -
Prci1g3653 490 ProSiteProfiles EF-hand calcium-binding domain profile. 103 138 IPR002048 GO:0005509
Prci1g3653 490 Gene3D - 20 179 - -
Prci1g3653 490 MobiDBLite consensus disorder prediction 1 24 - -
Prci1g3653 490 FunFam Mitochondrial substrate carrier family protein 196 488 - -
Prci1g3653 490 ProSiteProfiles Solute carrier (Solcar) repeat profile. 398 486 IPR018108 -
Prci1g3653 490 ProSiteProfiles Solute carrier (Solcar) repeat profile. 200 283 IPR018108 -
Prci1g3653 490 Gene3D Mitochondrial carrier domain 197 488 IPR023395 -
Prci1g3653 490 PRINTS Mitochondrial carrier protein signature 205 218 IPR002067 GO:0055085
Prci1g3653 490 PRINTS Mitochondrial carrier protein signature 258 278 IPR002067 GO:0055085
Prci1g3653 490 PRINTS Mitochondrial carrier protein signature 313 331 IPR002067 GO:0055085
Prci1g3653 490 PRINTS Mitochondrial carrier protein signature 359 377 IPR002067 GO:0055085
Prci1g3653 490 PRINTS Mitochondrial carrier protein signature 218 232 IPR002067 GO:0055085
Prci1g3653 490 PRINTS Mitochondrial carrier protein signature 407 429 IPR002067 GO:0055085
Prci1g3653 490 ProSiteProfiles Solute carrier (Solcar) repeat profile. 298 386 IPR018108 -
Prci1g3653 490 ProSiteProfiles EF-hand calcium-binding domain profile. 36 71 IPR002048 GO:0005509
Prci1g3653 490 PANTHER SOLUTE CARRIER FAMILY 25 158 488 - -
Prci1g3653 490 SMART efh_1 107 135 IPR002048 GO:0005509
Prci1g3653 490 SMART efh_1 40 68 IPR002048 GO:0005509
Prci1g3653 490 SMART efh_1 76 104 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3653 Prci-Chr1 53194109 53196397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3653 1 490 EF-hand Containing Proteins AT5G51050 64.315 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3653 K14684 - qsa:O6P43_006116 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3653 1 53194109 53196397 Prci1g3653 1 53194109 53196397 ECH