Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3582 ATGCAGACAAGGTCGGTTCAAGTAAAGAATGTTTCAGATCTAGCTACTGAGAGAGAGATTCACGAATTTTTCTCATTTTCTGGAGAAATCGAGCACATTGAGATCCAAAGTGATTCCGGGAAATTAAAGACAGCATACGTGACATTTAAAGACCCAAAGGCGCTTGAGATTGCGTTGTTGTTATCGGAAGTAATGGTGGTGGAAAATGCTACAAATGTTGCTCCTGTTGAAAATGTTACACCAAATGTTGAGGAGAAAACAAGTCCCACTAGCAGTGGAAGAATATATGTTAGTAGAGCACAAGATGTAGTTACAAGTATGCTCGCTAAAGGTTCGGCAATTAGACAAGATGCCTTGAATAAAGCTAAAGCATTTGATGAAAAGCATCAGTTTACTGCCAACGCATCTGCTAAGGTTGCTTCTTTTGACAAGAGGGTTGGTCTTACAGAGAAATTGACAGTTGGCATTTCTGCGGTTAATGAGAAGGTGAAGTATGTTGATCAGAGGCTTCATGTTTCAGATAAAACTATGGCCGCAATATTAGCAGCTGAGAGGAAGTTAAATGATACTGGATCAGCGGTCAAAACTAGCAGATATGTGACTGCTGGAACGACATGGTTAAATGGTGCTTTTGGTAAGGTGGCAAGGGCTGGACAGCTTGCCGGTACGAAGACTAGAGAAAAGTTCCATTTGGCTGTGTCTAACTTGACAGCGAAGGAGCCATCAGTTGCTGCATAA 738 0.416 MQTRSVQVKNVSDLATEREIHEFFSFSGEIEHIEIQSDSGKLKTAYVTFKDPKALEIALLLSEVMVVENATNVAPVENVTPNVEEKTSPTSSGRIYVSRAQDVVTSMLAKGSAIRQDALNKAKAFDEKHQFTANASAKVASFDKRVGLTEKLTVGISAVNEKVKYVDQRLHVSDKTMAAILAAERKLNDTGSAVKTSRYVTAGTTWLNGAFGKVARAGQLAGTKTREKFHLAVSNLTAKEPSVAA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3582 245 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 59 IPR000504 GO:0003723
Prci1g3582 245 Gene3D - 1 74 IPR012677 -
Prci1g3582 245 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 230 - -
Prci1g3582 245 SUPERFAMILY RNA-binding domain, RBD 3 66 IPR035979 GO:0003676
Prci1g3582 245 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 102 IPR000504 GO:0003723
Prci1g3582 245 SMART rrm1_1 5 74 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3582 Prci-Chr1 52653679 52663372 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3582 - - qsa:O6P43_006193 372.859