Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3576 ATGGCATCCCATATTGTCGGATATCCTCGCATGGGCCCCAAGAGAGAGCTCAAGTTTGCTCTGGAGTCATTCTGGGATGGGAAGAGCAGCGCTGAAGATTTGAAAAAGGTGGCCGCTGATCTCAGGGCATCAATCTGGAAGCAGATGGCTGATGCTGGGATCAAGTACATCCCCAGCAACACATTTTCTTTCTATGATCAGGTGCTCGATGCTACTGCCCTGCTTGGTGCTGTTCCACCTAGATATGGATGGACTGGTGGGGAGATTGGATTTGATACCTACTTCTCCATGGCCAGAGGTAATGCATCAGTACCTGCAATGGAGATGACCAAATGGTTCGACACCAACTATCACTTTATTGTCCCTGAATTGGGACCTGACGTAAACTTCTCTTATGCTTCTCACAAAGCTGTGGACGAGTACAAGGAAGCCAAAGCTCTTGGAGTAGATACGGTTCCAGTCCTGATTGGTCCCGTCTCATACTTGTTGCTCTCCAAACCTGCAAAGGGTGTTGAGAAAACCTTTTCTCTTCTCTCTCTCCTTCCAAAAATCCTTGCTATTTACAAGGAAGTTATAGCTGATCTTAAGGCCGCTGGTGCTTCATGGATCCAGTTTGATGAACCAACCCTTGTTTTGGACCTTGATCCCCACAAGCTCCAAGCATTTTCTGAAGCATACTCGGAACTTGAATCTTCTTTATCTGGATTGAATGTCCTGATTGAAACCTACTTTGCTGATATCCCTGCCGATGCTTACAAGACCCTCACTTCTCTCAAGGGTGTCACAGCTTATGGATTAGATCTTGTCCGTGGAACTCAGACCCTTAATTTGATCAAGGCTGGGTTCCCCAGCGGAAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCTAATGATCTTGCTGCTTCTCTAAGTTTACTACATGATCTTGAGGGCATTGTTGGCAAAGACAAACTTGTTGTGTCCACCTCCTGCTCGCTTCTTCACACTGCTGTTGATCTTGTAAATGAGACCAAGCTTGATGATGAGATCAAGTCATGGCTAGCCTTTGCTGCCCAGAAAATTGTTGAAGTTAATGCATTGGCCAAGGCACTGTCTGGTGGAAAAGATGAGGCCTTCTTCTCTGCTAATGCAGCAGCTCTGGCTTCAAGGAAGTCCTCTCCAAGAGTGACCAATGAGGCCGTTCAGAAGGCTGTTGCTTCATTGAAGGGTTCTGAACACCGCCGTGCCACTAATGTTAGTGCCAGGCTGGATGCTCAACAAAAGAAGCTTAACCTTCCAATCCTCCCAACCACTACTATTGGCTCCTTCCCTCAGACTGTAGAGCTGAGGAGGGTACGCCGAGAATACAAGGCTAACAAGATCTCCGAGGAAGAGTATGTTAAGTTCATTAGAGAAGAAATCCGCAAAGTTGTTGAACTTCAAGAAGAGCTTGATATTGATGTCCTGGTACATGGGGAACCAGAGAGAAACGATATGGTTGAGTACTTTGGCGAGCAGTTGGCTGGCTTTGCCTTCACTGTTAATGGGTGGGTGCAGTCTTACGGATCTCGTTGCGTGAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAAGCTATGACCGTGGTCTGGTCATCTATGGCTCAGAGCATGACCAAGCGCCCAATGAAGGGAATGCTTACTGGTCCTGTCACCATTCTGAACTGGTCCTTTGTTAGAAACGACCAGCCCAGATCTGAGACTACCTATCAGATTGCCTTGGCTATTAAGGAGGAAGTAGAAGATCTTGAGAAGGCCGGCATCAGCGTGATCCAAATTGACGAGGCTGCTTTGAGAGAGGGATTGCCTCTGAGGAAGTCGGAGCAAGCTCACTACTTGGACTGGGCTGTCCACTCCTTCAGGATCACCAACGTTGGTGTGAAGGACACTACTCAGATCCACACCCACATGTGCTACTCCCACTTCAACGACATCATCCACTCAATTATTGACATGGATGCTGATGTGATCACCATTGAGAACTCTCGTTCCGATGAGAAGCTTCTCTCAGTGTTCCGCGAAGGAGTGAAATACGGTGCCGGAATTGGCCCTGGTGTGTATGACATTCACTCTCCCAGGATTCCACCAACGGAGGAAATTGCGGATAGGATCAACAAGATGCTCGCAGTGCTGGAGAAGAACATCTTGTGGGTCAACCCTGATTGTGGGCTCAAGACTCGCAAGTACGCTGAGGTGAAGCCAGCCCTTACCAACATGGTTGTTGCCGCCAAAGTCATCCGCAATGAACTCGCCTCTGCCAAGTGA 2298 0.4822 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRASIWKQMADAGIKYIPSNTFSFYDQVLDATALLGAVPPRYGWTGGEIGFDTYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVNFSYASHKAVDEYKEAKALGVDTVPVLIGPVSYLLLSKPAKGVEKTFSLLSLLPKILAIYKEVIADLKAAGASWIQFDEPTLVLDLDPHKLQAFSEAYSELESSLSGLNVLIETYFADIPADAYKTLTSLKGVTAYGLDLVRGTQTLNLIKAGFPSGKYLFAGVVDGRNIWANDLAASLSLLHDLEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQKIVEVNALAKALSGGKDEAFFSANAAALASRKSSPRVTNEAVQKAVASLKGSEHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKANKISEEEYVKFIREEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQLAGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVVWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRSETTYQIALAIKEEVEDLEKAGISVIQIDEAALREGLPLRKSEQAHYLDWAVHSFRITNVGVKDTTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNILWVNPDCGLKTRKYAEVKPALTNMVVAAKVIRNELASAK 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3576 765 CDD CIMS_N_terminal_like 3 367 - -
Prci1g3576 765 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 760 IPR006276 GO:0003871|GO:0008270|GO:0009086
Prci1g3576 765 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 1 765 - -
Prci1g3576 765 NCBIfam 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 6 759 IPR006276 GO:0003871|GO:0008270|GO:0009086
Prci1g3576 765 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 5 394 - -
Prci1g3576 765 SUPERFAMILY UROD/MetE-like 3 395 IPR038071 -
Prci1g3576 765 Pfam Cobalamin-independent synthase, N-terminal domain 3 315 IPR013215 GO:0003871|GO:0008270|GO:0008652
Prci1g3576 765 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 395 758 - -
Prci1g3576 765 Gene3D - 5 525 IPR038071 -
Prci1g3576 765 Pfam Cobalamin-independent synthase, Catalytic domain 432 755 IPR002629 GO:0003871|GO:0008270|GO:0009086
Prci1g3576 765 CDD CIMS_C_terminal_like 433 756 IPR002629 GO:0003871|GO:0008270|GO:0009086
Prci1g3576 765 SUPERFAMILY UROD/MetE-like 397 759 IPR038071 -
Prci1g3576 765 PIRSF Met_synth_MetE 1 765 IPR006276 GO:0003871|GO:0008270|GO:0009086
Prci1g3576 765 Gene3D - 390 758 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3576 Prci-Chr1 52627918 52633024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3576 K00549 - gmx:547643 1380.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3576 1 52627918 52633024 Prci1g3576 1 52627918 52633024 ECH