Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3566 ATGTATCTTTCGCGGCGAATACTCTCCAAAGCCTCGCATCTCCGTCACTTCTCACAAGCCGCCGTAGCCGTGGTCCACCAAGAACCTCTTGACCTCCCACCATTCACGTATCTCGAGGGTTTTCCGAAGCCCGACTCCAGATACGCTGAGACGATCCTTGCTATACCTCGCTCCACTTCAGGAAGTATCATTTCTGCCAAAGAGCGCAAGGCTGGACGAGTTCCCAGCATCGTCTTCGAGCAAGAGGATGGCCAGCACGGGGGCAACAAGCGCCTCATTTCCGTCCGTACCAATCAGATCCGAAAGCTCGTCAACCATCTCGGTCGATCCTTCTTTTTGTCCAGACTCTTTGACCTGGAGGTTCGGACGGAGTTCGAGTCTGAAGAGATTGTAGAAAAGATTCGTGTTTTGCCCAGGCTGCTTCACCTGCATGCAGGCAGTGATGAACCGTTAAATGTCACATTCATAAGGGCTCCATCATATGCTTTTTTGAAAGTTAACGTTCCTCTTGTATTCAGAGGAGAAGATGTGTCCCCTGGATTGAAGAAAGGTGCTTATTTGAATACCATCAAGAGGACTGTCAAGTACCTATGCCCCGCAGATATCATCCCTCCATATATCGATGTGGACTTGAGTGAGTTAGATGTGGGACAGAAGTTAGTTATGGGGGACCTCATGGTTCATCCTGCACTAAAACTTCTTCAGTCAAAACACGAACCTGTTTGTAAAATTATGGGTCAAAGGGTCTCTGAGCAAAGGAAATCTAAATAA 771 0.4812 MYLSRRILSKASHLRHFSQAAVAVVHQEPLDLPPFTYLEGFPKPDSRYAETILAIPRSTSGSIISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRTEFESEEIVEKIRVLPRLLHLHAGSDEPLNVTFIRAPSYAFLKVNVPLVFRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLMVHPALKLLQSKHEPVCKIMGQRVSEQRKSK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3566 256 Pfam Ribosomal protein TL5, C-terminal domain 165 246 IPR020057 -
Prci1g3566 256 Gene3D Ribosomal Protein L25; Chain P 51 158 IPR020056 -
Prci1g3566 256 SUPERFAMILY Ribosomal protein L25-like 51 252 IPR011035 GO:0006412
Prci1g3566 256 FunFam 50S ribosomal protein L25 163 253 - -
Prci1g3566 256 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 30 251 - -
Prci1g3566 256 Pfam Ribosomal L25p family 54 155 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Prci1g3566 256 Gene3D Ribosomal protein L25, beta domain 163 253 IPR037121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3566 Prci-Chr1 52521751 52524878 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3566 K02897 - qsa:O6P43_009911 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3566 1 52521751 52524878 Prci1g3566 1 52521751 52524878 ECH