Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3559 ATGGGTGTGTCGGTTGATTCTCCGGAGGGAGGGAGTCTTGGAGGACAGGGTTCTTGGAGTTCATTGAGGTTTTTGACTAGGAGGAAGCAAGTGGATTCTGCCCACAAAAAGACCGAGGGTCAGCTTGCCAAGGAGTTATCTGTTCCCCATCTGATTGGAATTGGTGTTGGTGCGACAATTGGTGCTGGAGTCTACGTCCTTGTTGGAACAGTTGCTCGAGAACATTCTGGACCTGCCTTGGCCTTTTCTTTTCTGATAGCTGGAGTAGCGGCTGCTCTTTCTGCTTTTTTTTACGCAGAGTTGGCTAGTCGTTGTCCTTCTGCTGGAAGTGCATATCACTATTCGTACATATGTGTAGGGGAAGGTGCTGCCTGGTTGATTGGATGGGCCTTGATACTGGAATATACAATTGGTGGAGCAGCTGTTGCTCGTGGCATATCTCCTAACATGGCTGCATTTTTTGGAGGCATGGATCATTTGCCCTTCTTCTTAGCCCGCCAGCATATTCCTGGTACTGATATTGTCGTGGACCCATGTGCTGCAATTATGGTACTAATTATTACGGGACTCTTGTGCGTTGGCATCAAGGAGAGTACAACCGTACAAGGCATAGTCACATCGGTGAATGTGTGCGCCTTGATTTTTGTAATAGCAGCTGGTGGTTACTTGGGATTCAAGTCTGGATGGGTTGGATATGAACTTCCTTCAGGTTACTTTCCCTTTGGGGTTGATGGAATGCTTGCTGGTTCAGCAACAGTTTTCTTTGCATATATAGGTTTTGATTCTGTTGCCAGCACTGCCGAAGAGGTGAAAAATCCTCAACGAGATCTGCCGCTGGGTATTGGGGCTGCACTGTTTCTTTGTTGTGCATTGTATATGATGGTCTCCATCGTTGTCGTCGGCTTAGTACCTTATTATGCAATCAATCCTGACACCCCCATATCCTCTGCATTTGCAAACCATGGGATGCAATGGGCAGCTTACATAATAAACGCAGGAGCTTTTACAGCTCTCTGTGCATCATTGATGGGTGGTATACTCCCCCAGCCTCGTATTTTGATGGCTATGGCAAGGGACGGGCTGCTGCCACCGTTTTTTTCAGATATTAACAAGTTCAGCCAGGTTCCTGTTAAGAGCACAGTCGTTACCGGCCTTGTAGCTGCAATCTTGGCATCTTTAATGGATGTCTCTCAACTGGCTGGGATGGTTAGTGTGGGTACGCTTCTTGCATTCACCATGGTTGCAATATCTGTATTGATATTGAGATATATCCCTCCAGATGAGGTCCCATTACCACCTTCTCTCCAGGAATCAAATAATTCAGTACCATCAAAAGACCGTTTGATTGGTGATGACAGATATGGTGAAGATGGAGAGGCAAATATTGGTATTTCTAAGGACATCAAAGCTGTGGTTACCAAAGAGGATATGCCAATCAATTGTCCACTTATTTCTCGACATTTTGCCATAGGTAACTGCTTAGATGAAAGTAATAGGAGAAAAATCGTTGGGTGGATCATAACACTCACATGCTTAGGGGTGTTTATTCTCACATATGCAGCTTCGGATTTAAGTCTTATCAGGTTTTATTTGCCCGTTGGTGCCACTGCTGCCCATAGCTTGCATTCTCATCAATTCCTACTTGCTTATTAA 1653 0.4537 MGVSVDSPEGGSLGGQGSWSSLRFLTRRKQVDSAHKKTEGQLAKELSVPHLIGIGVGATIGAGVYVLVGTVAREHSGPALAFSFLIAGVAAALSAFFYAELASRCPSAGSAYHYSYICVGEGAAWLIGWALILEYTIGGAAVARGISPNMAAFFGGMDHLPFFLARQHIPGTDIVVDPCAAIMVLIITGLLCVGIKESTTVQGIVTSVNVCALIFVIAAGGYLGFKSGWVGYELPSGYFPFGVDGMLAGSATVFFAYIGFDSVASTAEEVKNPQRDLPLGIGAALFLCCALYMMVSIVVVGLVPYYAINPDTPISSAFANHGMQWAAYIINAGAFTALCASLMGGILPQPRILMAMARDGLLPPFFSDINKFSQVPVKSTVVTGLVAAILASLMDVSQLAGMVSVGTLLAFTMVAISVLILRYIPPDEVPLPPSLQESNNSVPSKDRLIGDDRYGEDGEANIGISKDIKAVVTKEDMPINCPLISRHFAIGNCLDESNRRKIVGWIITLTCLGVFILTYAASDLSLIRFYLPVGATAAHSLHSHQFLLAY 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3559 550 FunFam probable cationic amino acid transporter 42 434 - -
Prci1g3559 550 Gene3D Amino acid/polyamine transporter I 42 436 - -
Prci1g3559 550 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 25 533 - -
Prci1g3559 550 Pfam Amino acid permease 47 427 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3559 Prci-Chr1 52491837 52497396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3559 22 531 Organic Solute Cotransporters AT5G36940 66.794 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3559 K13863 - gmx:100820395 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3559 1 52491837 52497396 Prci1g3559 1 52491837 52497396 ECH