Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3557 ATGGGTGTGTCGGTTGATTCTCCGGAGGGAGGGAGTCTTGGAGGACAGGGTTCTTGGAGTTCATTGAGGTTTTTGACTAGGAGGAAGCAAGTGGATTCTGCCCACAAAAAGACCGAGGGTCAGCTTGCCAAGGAGTTATCTGTTCCCCATCTGATTGGAATTGGTGTTGGTGCGACAATTGGTGCTGGAGTCTACGTCCTTGTTGGAACAGTTGCTCGAGAACATTCTGGACCTGCCTTGGCCTTTTCTTTTCTGATAGCTGGAGTAGCGGCTGCTCTTTCTGCTTTTTTTTACGCAGAGTTGGCTAGTCGTTGTCCTTCTGCTGGAAGTGCATATCACTATTCGTACATATGTGTAGGGGAAGGTGCTGCCTGGTTGATTGGATGGGCCTTGATACTGGAATATACAATTGGTGGAGCAGCTGTTGCTCGTGGCATATCTCCTAACATGGCTGCATTTTTTGGAGGCATGGATCATTTGCCCTTCTTCTTAGCCCGCCAGCATATTCCTGGTACTGATATTGTCGTGGACCCATGTGCTGCAATTATGGTACTAATTATTACGGGACTCTTGTGCGTTGGCATCAAGGAGAGTACAACCGTACAAGGCATAGTCACATCGGTGAATGTGTGCGCCTTGATTTTTGTAATAGCAGCTGGTGGTTACTTGGGATTCAAGTCTGGATGGGTTGGATATGAACTTCCTTCAGGTTACTTTCCCTTTGGGGTTGATGGAATGCTTGCTGGTTCAGCAACAGTTTTCTTTGCATATATAGGTTTTGATTCTGTTGCCAGCACTGCCGAAGAGGTGAAAAATCCTCAACGAGATCTGCCGCTGGGTATTGGGGCTGCACTGTTTCTTTGTTGTGCATTGTATATGATGGTCTCCATCGTTGTCGTCGGCTTAGTACCTTATTATGCAATCAATCCTGACACCCCCATATCCTCTGCATTTGCAAACCATGGGATGCAATGGGCAGCTTACATAATAAACGCAGGAGCTTTTACAGCTCTCTGTGCATCATTGATGGGTGGTATACTCCCCCAGCCTCGTATTTTGATGGCTATGGCAAGGGACGGGCTGCTGCCACCGTTTTTTTCAGATATTAACAAGTTCAGCCAGGTTCCTGTTAAGAGCACAGTCGTTACCGGCCTTGTAGCTGCAATCTTGGCATCTTTAATGGATGTCTCTCAACTGGCTGGGATGGTTAGTGTGGGTACGCTTCTTGCATTCACCATGGTTGCAATATCTGTATTGATATTGAGATATATCCCTCCAGATGAGGTCCCATTACCACCTTCTCTCCAGGAATCAAATAATTCAGTACCATCAAAAGACCGTTTGATTGGTGATGACAGATATGGTGAAGATGGAGAGGCAAATATTGGTATTTCTAAGGACATCAAAGCTGTGGTTACCAAAGAGGATATGCCAATCAATTGTCCACTTATTTCTCGACATTTTGCCATAGGTAACTGCTTAGATGAAAGTAATAGGAGAAAAATCGTTGGGTGGATCATAACACTCACATGCTTAGGGGTGTTTATTCTCACATATGCAGCTTCGGATTTAAGTCTTATCAGATCTGTTCGTTTCATGTTTTGTGGTGTGGGTGGCATTCTTGTTCTATCTGGTCTCATCTTCTTAACCTGTATAGATCAAGATGATGCAAGACACAGTTTCGGGTACTCTGGAGGTTTTATTTGCCCGTTGGTGCCACTGCTGCCCATAGCTTGCATTCTCATCAATTCCTACTTGCTTATTAATCTTGGAGCTGCTACATGGGGTCGTGTGTCAATATGGCTTGCCATGGGAGTGCTTGTTTACGTGTTCTATGGCAGAACCCACAGTTCTCTAAGAGATGCAGTTTATGTTCCTGTATCTCGTGCGGATGAAATGTATCGTACTTCCACAAGCTGTCTAGCTTAA 1929 0.4526 MGVSVDSPEGGSLGGQGSWSSLRFLTRRKQVDSAHKKTEGQLAKELSVPHLIGIGVGATIGAGVYVLVGTVAREHSGPALAFSFLIAGVAAALSAFFYAELASRCPSAGSAYHYSYICVGEGAAWLIGWALILEYTIGGAAVARGISPNMAAFFGGMDHLPFFLARQHIPGTDIVVDPCAAIMVLIITGLLCVGIKESTTVQGIVTSVNVCALIFVIAAGGYLGFKSGWVGYELPSGYFPFGVDGMLAGSATVFFAYIGFDSVASTAEEVKNPQRDLPLGIGAALFLCCALYMMVSIVVVGLVPYYAINPDTPISSAFANHGMQWAAYIINAGAFTALCASLMGGILPQPRILMAMARDGLLPPFFSDINKFSQVPVKSTVVTGLVAAILASLMDVSQLAGMVSVGTLLAFTMVAISVLILRYIPPDEVPLPPSLQESNNSVPSKDRLIGDDRYGEDGEANIGISKDIKAVVTKEDMPINCPLISRHFAIGNCLDESNRRKIVGWIITLTCLGVFILTYAASDLSLIRSVRFMFCGVGGILVLSGLIFLTCIDQDDARHSFGYSGGFICPLVPLLPIACILINSYLLINLGAATWGRVSIWLAMGVLVYVFYGRTHSSLRDAVYVPVSRADEMYRTSTSCLA 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3557 642 FunFam probable cationic amino acid transporter 42 434 - -
Prci1g3557 642 PIRSF AA_transporter 21 431 - -
Prci1g3557 642 PIRSF AA_transporter 484 624 - -
Prci1g3557 642 Pfam Amino acid permease 47 427 IPR002293 GO:0016020|GO:0022857|GO:0055085
Prci1g3557 642 Coils Coil 641 642 - -
Prci1g3557 642 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 25 618 - -
Prci1g3557 642 Pfam C-terminus of AA_permease 567 617 IPR029485 -
Prci1g3557 642 Gene3D Amino acid/polyamine transporter I 42 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3557 Prci-Chr1 52491576 52497390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3557 22 642 Organic Solute Cotransporters AT5G36940 67.247 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3557 K13863 - gmx:100820395 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3557 1 52491576 52497390 Prci1g3557 1 52491576 52497390 ECH