Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3533 ATGGATATCAAAATTTTCATGGTTTCTTTCATGCTAACCTCAATATTGTTCTTTATTCTTTATATCCCCACCAGGTTAACCCTGCCCATCTCCAGCTCCAGGCCTGTGATGAAACATTTCAACGTCTCAAAAACCAGCAAACTGTATCCAGTTTCTTTTGCTTACTTGATCTCTGCATCCAAAGGAGACGCCGTAAGGCTCAAAAGGTTGGTGAAGGCGCTGTACCATCCGGGGAATTACTATCTCATTCATATGGATTACGGGGCACCCGAATCAGAACTCAGGGATGTTGCTGAGTTCGTGGCCGGAGACCCTGTTTTTGGTGATGTGGGGAATGTTTGGGTTGTTGGGAAGCGTAATTTGGTGACTTATAGAGGACCAACCATGCTTGCTACCACACTCCATGCTATGGCTATGCTTCTGAGGACTTGCCAGTGGGACTGGTTTATTAATCTTAGTGCCTCTGACTATCCCTTGGTTACACAAGATGATCTGATCCAATCATTTTCTGAGTTGCCAAGAAATATCAATTTCGTACAGCATAGCAGTCGCCTGGGTTGGAAACTGAATAAGAGAGGCAAGCCAATAATTATAGACCCAGGGCTTTACCGTCGCAACAAGTCAGAGATTTGGTGGGGCATTAAGCAAAGAAGTTTACCGACATCTTTCAAACTCTACACAGGTTCAGCTTGGACCATACTATCAAGATCGTTCGCAGAGTATTGCATAGTGGGGTGGGAAAATCTGCCAAGGACCTTGCTTCTGTACTACACTAACTTTGTGTCGTCGCCTGAAGGGTATTTCCAGACAGTGATTTGCAATTCTGAAGAGTACAGGAACACCACAGCTAACCATGACCTTCACTACATTACTTGGGATGTGCCTCCAAAGCAACACCCCAGGTCTCTTGGTCTCAAAGACTACCGCAAAATGGTTCTAAGCAGCCGTCCGTTTGCCAGAAAATTCAAGAAAAACGATGCTGTTCTTGATAAAATCGATAGAGAACTTCTCAAAAGGCGTCGTGGGCAATTTTCTTTTGGAGGATGGTGTTCCAGTGGTGGGAGAAGAAGCAGAGGATGCTCTGATTTTAGAATTGAGAATTTTGGCGTTCTCAGCTCTGGCCCTGGCCAGAGGAGGTTGAGAAATTTGTTATCCAAGCTTCTCTCTGATAGATTTTTCTACAAGATGCAATGCAGATAA 1200 0.445 MDIKIFMVSFMLTSILFFILYIPTRLTLPISSSRPVMKHFNVSKTSKLYPVSFAYLISASKGDAVRLKRLVKALYHPGNYYLIHMDYGAPESELRDVAEFVAGDPVFGDVGNVWVVGKRNLVTYRGPTMLATTLHAMAMLLRTCQWDWFINLSASDYPLVTQDDLIQSFSELPRNINFVQHSSRLGWKLNKRGKPIIIDPGLYRRNKSEIWWGIKQRSLPTSFKLYTGSAWTILSRSFAEYCIVGWENLPRTLLLYYTNFVSSPEGYFQTVICNSEEYRNTTANHDLHYITWDVPPKQHPRSLGLKDYRKMVLSSRPFARKFKKNDAVLDKIDRELLKRRRGQFSFGGWCSSGGRRSRGCSDFRIENFGVLSSGPGQRRLRNLLSKLLSDRFFYKMQCR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3533 399 PANTHER GLYCOSYLTRANSFERASE 8 398 IPR044610 GO:0015020
Prci1g3533 399 Pfam Core-2/I-Branching enzyme 53 311 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3533 Prci-Chr1 52459378 52462305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3533 53 399 Glycosyltransferase AT4G27480 57.759 4.40e-150 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3533 - - gmx:100812712 638.647