Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3520 ATGTCTCTTGCAGATTTTTCGGCAAAATGGCTAACCAAATCCGCTGAACAGCTCATCTCTATCATCACCTCCATCGTTTTCCTCGTTCTTGATTTCCTGGACACTGTTTTTTGCCTGATATATAAATACCTTGATGAACATATTGAAGGGGATGCCCCCACGTGTTGCTGCGGAAACAGGGGTAAGCACAAGGAGAACTCGAAAGATGATAAGGACGATGAATTATCAGATACCTTTTACAGGAGAAAAAACTTGTTCAGGGACATGGGTTTCCTTCGAATTGGAAGGAAACAACTGGAAGAATCTGAGAGAAAATTCGGGGGAGGTAGGTGGTCGATGAACCGTTGGTCTGATTGTGGGTGCGAGTCGTGCCTTTCGTGGGTGAGTGATGGTGATCACAGACTTCATTTTGTGGTGAAAGAGCCCTCGATAGCTGCTGACGAGAACTGCAAGGGAATGCCCTCTGAGAATGTGGTTTTTTTGCATGGGTTTCTCTGTTCTTCGTCGTTCTGGACACAAACAGTATTCCCAAATCTTTCTGAACAAGCAAAGCAGAATTACCGATTGATTGCGGTGGATCTGCTAGGATTTGGTAGGAGCCCCAAGCCAAGAAATTGTTCCTACACTTTGAGGGATCATGTGGGAATGATAGAGAAATCTGTGGTTCACCCATTGAATTTAAGTTCTTTTCATCTGGTTGCACACTCTATGGGTTGTATAATTGCACTGGCTTTGGCTGCAAAGTACCCCAGGTGTGTTAAATCCATCACCATTGTTGCCCCTCCATACTTTCCTTCTGGGGGAAACGATGCTAGTTTAAATGCACTCACAAAACTTGCTGGCAAGAAACTGTGGCCGCCATTGGCATTCGGTTCTTCCTTCATGTCGTGGTATGAGCACTTGGGTCGATTTGTTTGCCTCATCTTTTGCAGAAATCACAGGATATGGGAGAAAATTATCAAGTTCGTTACTTTCAAGAGGGATCTTCATTTCTTGACCATAGACTTGACCAGGCACACCCATCAATCAGCTTGGAGCTCCATGCACAATGTGATTTGCGGGGGCGCGAAATTTTTGGATAGTTACCTGGAAGTTTTGAGTGAAGCTGGGGTCAGAATAAATGTGATTCGAGGTGACAGAGATGGTGTTGTCCCGTCGGAGTGCTGCTATAACTTGAAGCTGAAGGCTCCAAAAGCTGAGATGAGCACCGTAAGAAATACAGATCATGGCACCGTAATTTTTGGCAGAGAGAAGGAATTTGCTCATTACCTGGAGGATATATGGGCATCTTGCTGA 1296 0.4491 MSLADFSAKWLTKSAEQLISIITSIVFLVLDFLDTVFCLIYKYLDEHIEGDAPTCCCGNRGKHKENSKDDKDDELSDTFYRRKNLFRDMGFLRIGRKQLEESERKFGGGRWSMNRWSDCGCESCLSWVSDGDHRLHFVVKEPSIAADENCKGMPSENVVFLHGFLCSSSFWTQTVFPNLSEQAKQNYRLIAVDLLGFGRSPKPRNCSYTLRDHVGMIEKSVVHPLNLSSFHLVAHSMGCIIALALAAKYPRCVKSITIVAPPYFPSGGNDASLNALTKLAGKKLWPPLAFGSSFMSWYEHLGRFVCLIFCRNHRIWEKIIKFVTFKRDLHFLTIDLTRHTHQSAWSSMHNVICGGAKFLDSYLEVLSEAGVRINVIRGDRDGVVPSECCYNLKLKAPKAEMSTVRNTDHGTVIFGREKEFAHYLEDIWASC 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3520 431 Gene3D alpha/beta hydrolase 126 430 IPR029058 -
Prci1g3520 431 PANTHER HYDROLASE 125 421 - -
Prci1g3520 431 PRINTS Alpha/beta hydrolase fold signature 232 245 IPR000073 -
Prci1g3520 431 PRINTS Alpha/beta hydrolase fold signature 186 201 IPR000073 -
Prci1g3520 431 PRINTS Alpha/beta hydrolase fold signature 246 259 IPR000073 -
Prci1g3520 431 SUPERFAMILY alpha/beta-Hydrolases 151 426 IPR029058 -
Prci1g3520 431 Pfam alpha/beta hydrolase fold 158 263 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3520 Prci-Chr1 52262711 52264782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3520 22 431 Acyl Lipid Metabolism Gene Families AT5G17780 50.121 2.90e-149 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3520 - - gmx:100775258 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3520 1 52262711 52264782 Prci1g3520 1 52262711 52264782 ECH