Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3518 ATGCCGTGTCATCCACGAAGTTCTCAGCTCTCCACTGAATTCGATAATTCAACCTTCAAGAAGGATAATCTAAATGCTGAGCCCTCCATCGGCAGTCGAGCAATACTAGTGAACACCGAGGAAATGGAAGCAACCCGCGAGACAGAAACGCTATCAGAGAATCAAACACCTTCAACAAATGACGAAGCATCCAAGTGCAGTAGAAAAAACGACAACGTTGTTCCTCTTAAGGTTTTCATGTATGACTTACCTCCAGAGTTCCATTTTGGACTCTTGGATTGGAAACCCGAAGGAAATACTGTTTGGCCTGACATTTCAACCCAAATACCTCACCATCCTGGGGGCTTGAATTTACAACACAGCATAGAATTTTGGCTCACCATGGATCTTCTTGCTTCAGAACTACCTGAACCCCCCAATGCTGGCGCTGCAATGAGAGTTCGCAATGTTAGCGAAGCTGATATCATATTTGTTCCGTTCTTTTCTTCTTTGTGCTATAACCGGCATTCCAAAACCAATAAACACGAAAGAAAGAGCATGAACAGGGTACTGCAAGAGAAGTTAGTGCAGTTTCTGATGTCTCGAGAGGAATGGAAGAGATCTGGCGGAGTGGACCACTTGATATTAGCTCACCATCCAAATAGTATGTTAACGGCCAGAACGAAGCTGTGGCCTGCTACACTCATACTCTCAGACTTTGGGAGGTATCCTCCAAACATAGCAAATGTTGAGAAAGACGTGATTGCACCATATAAACACGTGGTCAGGTCCTACGTCAACGATTCCTCTGACTTCGATAACCGACCGATTTTGCTCTACTTTCAAGGGGCAATTCACAGAAAAGATGGTGGCCATGCTAGGCTAGCTCTGTATAACATGCTGAAAGATGAGAAAGAAGTGCATTTTTCATCTGGGAGTGTTCAGAAAGGTGGGATCAGGCAAGCAACGGAGGGAATGCATTCTTCTAGGTTCTGTCTCAATATAGCTGGTGACACCCCTTCATCAAATCGCCTGTTTGACGCCATTGCTAGTCACTGTGTTCCTGTGATCATAAGTGATGAGATTGAGCTGCCATACGAGGATGTCGTCGACTACTCTGAGTTCTGCATATTTGTTCGGACAAGAGACGCACTCAAGAGAAATTATCTGATAAATTTCATTAGGAGTATCGGCAAAGAAGAATGGACCCGAATGTGGAAGAAACTGAAAGAGGTGGAACACATGTTCGAGTATCAGTATCCATCAAAGGAAGGAGATTCTGTGCAGATGATTTGGCGGGCCGTGGCTCGAAGAGTTCCTGCAATGAGACTCAAGTTACACAGATCCAGGCGCTATACTCGATCTCTGCCTAAGAAAGAGAGAAGCTTACCCACAATACCTGCACCAGTGAATTACTGGTTAGAAAGGAGAAATATTATTGTAAGAAACCCCGCAGCCTAG 1440 0.4472 MPCHPRSSQLSTEFDNSTFKKDNLNAEPSIGSRAILVNTEEMEATRETETLSENQTPSTNDEASKCSRKNDNVVPLKVFMYDLPPEFHFGLLDWKPEGNTVWPDISTQIPHHPGGLNLQHSIEFWLTMDLLASELPEPPNAGAAMRVRNVSEADIIFVPFFSSLCYNRHSKTNKHERKSMNRVLQEKLVQFLMSREEWKRSGGVDHLILAHHPNSMLTARTKLWPATLILSDFGRYPPNIANVEKDVIAPYKHVVRSYVNDSSDFDNRPILLYFQGAIHRKDGGHARLALYNMLKDEKEVHFSSGSVQKGGIRQATEGMHSSRFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDVVDYSEFCIFVRTRDALKRNYLINFIRSIGKEEWTRMWKKLKEVEHMFEYQYPSKEGDSVQMIWRAVARRVPAMRLKLHRSRRYTRSLPKKERSLPTIPAPVNYWLERRNIIVRNPAA 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3518 479 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 76 441 IPR004263 GO:0006486|GO:0016757
Prci1g3518 479 MobiDBLite consensus disorder prediction 43 67 - -
Prci1g3518 479 MobiDBLite consensus disorder prediction 49 63 - -
Prci1g3518 479 Pfam Exostosin family 75 383 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3518 Prci-Chr1 52251341 52253505 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3518 - - pcin:129291022 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3518 1 52251341 52253505 Prci1g3518 1 52251341 52253505 ECH