Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3506 ATGAGGCGAGTCTGCAAATTGATTCAAGCTCGTGCGCTGTGTGTGTGGCTTTTCCTCTCACTGGCACTGAATCCAGAGCCATTGTTATCAGATGCTTCAAGTGACTGTGATTTTCCGGCCATATTCAACTTTGGAGATTCCAATTCTGACACCGGTGGCCTCTCTGCTGCCTTCGGCCAAGCCGGCCCTCCTCACGGCGAGTCCTTCTTCCGCCGCCCTGCCGGACGCTACTGCGACGGCCGTCTCGTCATTGATTTCATAGCTGAGAAGCTTGGTCTACCATATTTGAATGCTTTCCTTGATTCGGTTGGCTCCAATTTTACGCATGGAGCCAACTTCGCCACAGCCGGATCCACCATCAGGCCTCAGAATACAACCCTTCATCAGGTTGGTGGGTTCAGTCCTTTCTCTTTGGACGTTCAGTTCAATCAATTCAGTGATTTCCAGCGCAGATCTCAAACTTATCGCAATGAAGGAGGAGTATATACAGCATTGCTACCAAAAGCACAAGACTTTTCTCGTGCATTGTACACTTTCGATATTGGGCAGAACGACTTGACGGCAGGTTATTTCCACAACATGTCCACAGATCAAGTCAAAGCATATGTTCCTGATGTTTTAGCACAGTTCAACAACATTGTTAAGTATGTATATGATCATGGAGGAAGGTCGTTCTGGATACACAATACAGGTCCAGTTGGTTGTTTGCCATACATAATGGACCTTCATCCAGTGAAAACAAGTCAGGTGGATAAAGCGGGATGCGTCATCCCTTACAACGAAGTTGCTCGATACTTTAATCGTCAATTAAAAGCAGCTGTGCTTCATCTCAGAAAGAAACTTCCCTTGGCTGCAATTACCTATGTTGATGTCTACTCTGTCAAGTACTCTATCAGTCAAGCAAAGAAGCATGGCTTTATGGAGCCCCTGAGAGCTTGCTGTGGGCATGGTGGGAAGTACAACTACAATATACACATTGGATGTGGAGGAAAGATCAAGGTTCGTGGCAAAGAGGTGTTAGCGGGGCAGCCTTGCATGGATCCATCGGTTTGGGTTAATTGGGATGGTGTGCACTACACTCAGGCTGCTAATAAGTGGGCATTTGAACAAATTGTGGATGGATCACACTCTGATCCTCCTATTCCATTGAGTAAGGCATGTCACAGGCACCACAGTTGA 1179 0.4682 MRRVCKLIQARALCVWLFLSLALNPEPLLSDASSDCDFPAIFNFGDSNSDTGGLSAAFGQAGPPHGESFFRRPAGRYCDGRLVIDFIAEKLGLPYLNAFLDSVGSNFTHGANFATAGSTIRPQNTTLHQVGGFSPFSLDVQFNQFSDFQRRSQTYRNEGGVYTALLPKAQDFSRALYTFDIGQNDLTAGYFHNMSTDQVKAYVPDVLAQFNNIVKYVYDHGGRSFWIHNTGPVGCLPYIMDLHPVKTSQVDKAGCVIPYNEVARYFNRQLKAAVLHLRKKLPLAAITYVDVYSVKYSXISQAKKHGFMEPLRACCGHGGKYNYNIHIGCGGKIKVRGKEVLAGQPCMDPSVWVNWDGVHYTQAANKWAFEQIVDGSHSDPPIPLSKACHRHHS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3506 393 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 24 380 - -
Prci1g3506 393 Gene3D SGNH hydrolase 29 377 IPR036514 -
Prci1g3506 393 CDD SGNH_plant_lipase_like 39 376 IPR035669 -
Prci1g3506 393 Pfam GDSL-like Lipase/Acylhydrolase 41 372 IPR001087 GO:0016788
Prci1g3506 393 FunFam GDSL esterase/lipase At1g09390 29 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3506 Prci-Chr1 52223004 52225945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3506 39 391 Acyl Lipid Metabolism Gene Families AT4G10950 27.989 1.66e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3506 - - gmx:100819985 660.603