Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3419 ATGAGAATGTTGGGAATGGCTGCAGCCATTGATCATCATCATGGATTCAAGCCATTTAGTCAATCCTATGGATGCATGCTTCAACGCTGCGGTCCCCATGATCACAACATGCTAGAATTTAGCCAAATTAGCCATGCTTTTAAACCAGCATTTGAAGCAGATAACATCCACCGCAGTTCCTCCACTCCATGTCTCCCCCTAACCACTTCAACGGAGGAAGAGCTTGGTTCTAATCCAAGGATTGCGATGGTTGGTGGATGTGGAGCTCCTTCACATGCTCTTGTTGTCGAGGTTGCCATAGCTATGGCCTCTGGTGTGTCTCAACCACTGTCAAAGGGGCTAGGTGATGCCTATGTTTTCCGCAGCCAAAATGGTGATGACATTGCTGTGGCAAAGCCATCCGATGAAGAACTTTTAGCCTTCAGTAAACCAAAGGGCTTGGGTGGTCGAATGCTGGGCCAACCTGGATTGAAAGGCTCAATTCGGGTGGGTGAAAGTGGCATACGCGAATTGGCTGCTTATCTCCTTGACTATGAAGGCTTCGCTGGAGTGCCTCCGTCAGCTTTGGTAAAATTCTTCAATGCTCCCTTTTTTGTTAATGATGCAGCTGAAGTTCCTCCCACACAATGTAAAATTGCTTCTCTCCATCGCTTTGTTGATCATGAATTTGACGCAGGAGAGTTGGGTCCTTCTTTCTACTCAGTTGCTTCAGTTCACCGGATTGGGATTTTAGACATTAGACTTCTAAATCTTGACAGGCATGCAGGAAATATGCTTGTAAAGAAAAATAACCGCAAGGGCAATGGAGTTGCTGAGCTTGTTCCGATAGACCATGGACTTTGCCTGCCTGAATGGATGGACGATCCATATTTTGAGTGGCTGCATTGGCCACAAGCCTCCATTCCTTTCTCAGAGTCCGAGCTTGAGTACGTGTACAAACTCGATCCGTTTAGAGATGCAGAACTGTTAAGAACCGAGCTTCCTTTGTTGAGGGAGTCCTCTATACGGGTTCTTCTGGTTTGCACCGTCTTCTTAAAGCAAGCTGTTGCTGCTGGACTTTGTCTTGCTGATATAGGTCAAATGATGACTAGAGAATTTTGTCGTGGAGAAGAAACAACGAGTGAGATAGAAAATATTTGTTGGCGAGTCATGTCTAACATCCCTTATGTTTGCAACGATGGGAAAAGAAAAGAAGAAACTGAAAGCGAGTTCAAAGTATTCCAATTTGACAATCAAATTCAAGATGGATCCAATGAAGGGTTGGGACTTCCTCAATTCTTGCAGATCCATCATGGAGTGCCTCAGGTGCCCAAAATGCCGAAGTTTTCATTTGCGGGATCAATGAATGGATTGACAGTACTGCCTCCATTGAACGACACAAACGATAATTATACTACAAATGTTGATACAGGAAAAACTAATGAGAACGCTGAGAGTTACACTGAGTGGGGTAGAGAAAGGAGTTTGAGTTTCTCTTCGTGGAGCCACAATTGTGAAAGTAGAGGCCTTTCCTTTGCAGGCCTGAACCTAAGCGAGTGGGAGTTGTTTCTGGATATTTTTGTGAAGCTTTTGCCTAGAGTATTTGAGGCTAAGAAGAGCAAAAAATGA 1608 0.4459 MRMLGMAAAIDHHHGFKPFSQSYGCMLQRCGPHDHNMLEFSQISHAFKPAFEADNIHRSSSTPCLPLTTSTEEELGSNPRIAMVGGCGAPSHALVVEVAIAMASGVXSQPLSKGLGDAYVFRSQNGDDIAVAKPSDEELLAFSKPKGLGGRMLGQPGLKGSIRVGESGIRELAAYLLDYEGFAGVPPSALVKFFNAPFFVNDAAEVPPTQCKIASLHRFVDHEFDAGELGPSFYSVASVHRIGILDIRLLNLDRHAGNMLVKKNNRKGNGVAELVPIDHGLCLPEWMDDPYFEWLHWPQASIPFSESELEYVYKLDPFRDAELLRTELPLLRESSIRVLLVCTVFLKQAVAAGLCLADIGQMMTREFCRGEETTSEIENICWRVMSNIPYVCNDGKRKEETESEFKVFQFDNQIQDGSNEGLGLPQFLQIHHGVPQVPKMPKFSFAGSMNGLTVLPPLNDTNDNYTTNVDTGKTNENAESYTEWGRERSLSFSSWSHNCESRGLSFAGLNLSEWELFLDIFVKLLPRVFEAKKSKK 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3419 536 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 55 535 IPR044571 -
Prci1g3419 536 Pfam Phosphatidylinositol 3- and 4-kinase 128 358 IPR000403 -
Prci1g3419 536 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 105 397 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3419 Prci-Chr1 51627522 51631184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3419 6 525 Acyl Lipid Metabolism Gene Families AT2G40850 47.486 1.19e-153 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3419 - - pcin:129309440 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3419 1 51627522 51631184 Prci1g3419 1 51627522 51631184 ECH