Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3402 ATGTTCGCAAACATGCGTATGCATAAGATTTTGCAAAGGGGACTGTTCTTTAATCGCCTCCAGCTTTGGACGATGCCGAGCTTGGACGATTCTCCTCGTTTAATGACTCCGGTCTCAAGAGCTGGCATTAACAAAATCTGGAATCATACCGCTTGTGCTAGTGTTATTGGAGTCAATGGACTGGAGGCTGTCAGTTTTTGGAACAGCGGCAAGGGAATTCGTCATTCCTCGTCTGATAGCAATGGTCGATGTACTGCAAAGGAGTTCTCTAGTAAATTACTTAAGAGTATTCCAGACCATGTGAAGATAGTGGAGGTTGGTCCAAGGGATGGATTGCAGAATGAGAAGAATATAGTTCCTACTGCCGTGAAAGTTGAATTGATAAACCTGCTAGTTTCTTCTGGGTTGCCTGTTGTCGAGGCTACAAGTTTTGTGTCACCAAAATGGGTACCACAGCTGGCAGATGCAAAGGATGTAATGGCAGCAATTCAGAATGTCGAAGGTGCTAGATTTCCAGTCTTAACTCCAAATCTTAAAGGTTTTGAGGCAGCTGTTGCTGCTGGTGCAAAGGAAGTGGCTGTGTTTCCTGCAGCTTCAGAATCATTCTCTAAAGCAAATCTAAACTGTAGCATTGAGGATAATCTTGCTCGATGCCGTGACATTGCTTCAGCTGCTAGCAAGCTCTCAATCCCTGTTCGTGGATATATATCTTGTGTTGCGGGATGTCCTCTTGAAGGATTTGTTGCTCCAGCTAAAGTAGCCTACGTGGCAAAAGCACTCTATGATATGGGTTGCTCAGAGATTTCACTAGGCGATACCATTGGTGTTGGCACACCTGGTACTGTCATTCCAATGCTTGAAGCTGTTCTTGATGTTGTCCCTGTTGACAAGCTTGCTGTTCATTTTCATGATACTTATGGGCAGGCTCTTTCAAATACTCTTGTCTCACTTCAGATGGGGATCAGCACGGTGGATTCGTCGGTGTCTGGTCTTGGGGGTTGCCCATATGCGAAGGGTGCAACGGGGAATGTTGCCACAGAGGATGTTGTGTACTTGTTGAATGGACTGGGAGTGAAAACCAACGTTGACCTCAGAAAGCTTATGGCGGCTGGGGAGTACATCTGCAAGCATTTAGGACGTGTTTCTGGTTCTAAAGCTGCAACTGCCTTGACTAAACTTACAGCTAATGCCTCCAAACTCATGCTGCTATATCGAGAGGGACTAGTGCCTCAACCCTTGATACAGTTTTACGGAGTGAGCGCATCAGTAACGCGTTTTTGTCATGACTAA 1290 0.4566 MFANMRMHKILQRGLFFNRLQLWTMPSLDDSPRLMTPVSRAGINKIWNHTACASVIGVNGLEAVSFWNSGKGIRHSSSDSNGRCTAKEFSSKLLKSIPDHVKIVEVGPRDGLQNEKNIVPTAVKVELINLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCSIEDNLARCRDIASAASKLSIPVRGYISCVAGCPLEGFVAPAKVAYVAKALYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPVDKLAVHFHDTYGQALSNTLVSLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYLLNGLGVKTNVDLRKLMAAGEYICKHLGRVSGSKAATALTKLTANASKLMLLYREGLVPQPLIQFYGVSASVTRFCHD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3402 429 CDD DRE_TIM_HMGL 103 376 - -
Prci1g3402 429 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 95 393 - -
Prci1g3402 429 Pfam HMGL-like 101 374 IPR000891 GO:0003824
Prci1g3402 429 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 87 394 IPR043594 GO:0016833
Prci1g3402 429 ProSiteProfiles Pyruvate carboxyltransferase domain. 101 368 IPR000891 GO:0003824
Prci1g3402 429 SUPERFAMILY Aldolase 96 387 - -
Prci1g3402 429 Gene3D Aldolase class I 94 393 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3402 Prci-Chr1 51411291 51417072 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3402 K01640 - gmx:100801507 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3402 1 51411291 51417072 Prci1g3402 1 51411291 51417072 ECH